CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90070	Soybean	endoplasmic reticulum	92.95	92.95
PGSC0003DMT400002456	Potato	endoplasmic reticulum	72.2	72.5
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	71.37	70.78
AT4G14965.1	Thale cress	golgi	70.95	69.8
CDY06492	Canola	golgi	70.54	69.67
VIT_02s0012g02780.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, vacuole	70.95	68.13
TraesCS4B01G256900.1	Wheat	endoplasmic reticulum	65.98	67.09
Bra037079.1-P	Field mustard	golgi	67.63	67.08
CDY08286	Canola	golgi	67.63	67.08
GSMUA_Achr6P14400_001	Banana	endoplasmic reticulum, golgi	67.63	66.53
TraesCS4D01G256800.1	Wheat	endoplasmic reticulum	63.9	64.98
Zm00001d048139_P001	Maize	cytosol	44.81	63.91
EER95310	Sorghum	endoplasmic reticulum, golgi	62.66	63.71
TraesCS4A01G048100.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.66	63.71
Os03t0205500-01	Rice	endoplasmic reticulum	62.24	63.29
Zm00001d048140_P001	Maize	extracellular, plasma membrane	18.26	53.01
HORVU4Hr1G069740.2	Barley	golgi, mitochondrion, peroxisome, plastid	63.9	45.97
KRH61642	Soybean	cytosol	15.77	38.0
KRH52307	Soybean	nucleus	16.6	36.04
KRH31695	Soybean	cytosol	11.62	35.44
KRH75821	Soybean	cytosol, nucleus, plastid	10.79	30.95
KRH62716	Soybean	mitochondrion	8.71	26.58
KRH25811	Soybean	mitochondrion	10.37	25.51
KRH09074	Soybean	endoplasmic reticulum	19.09	20.72
KRH38500	Soybean	endoplasmic reticulum	18.67	20.45
KRG91473	Soybean	endoplasmic reticulum	18.67	20.0
KRH35342	Soybean	endoplasmic reticulum	19.09	19.57
KRG94134	Soybean	endoplasmic reticulum	14.94	18.0

Protein Annotations

EntrezGene:100789028	MapMan:11.3.2.1.4	Gene3D:3.10.120.10	EMBL:ACUP02007822	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
EnsemblPlantsGene:GLYMA_13G004000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	UniProt:I1LXK9	InterPro:IPR001199	InterPro:IPR036400
EnsemblPlants:KRH17625	ProteinID:KRH17625	ProteinID:KRH17625.1	ProteinID:KRH17626.1	PFAM:PF00173	PANTHER:PTHR10281
PANTHER:PTHR10281:SF4	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000233B66C	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:1106894..1119235

Molecular Weight (calculated)

26603.7 Da

IEP (calculated)

7.794

GRAVY (calculated)

-0.272

Length

241 amino acids

Sequence
(BLAST)

001: MSLKTLTTSP LSGITVLVLL LALLLRFYIK FDTAERLFSA EELSLLNGTD EGLPILLGIL GSVFDVTKGK SHYGSGGGYN HFAGRDASRA FVSGNFSGDG
101: LTDSLRGLSS TEVKSIVEWR DFYHKSYKYV GKLVGRYYDS QGNPTKYLKG VEAKAARGAQ LLEKQKIEEA KLPSCNSRWS QDEGGEVWCD VGYPRLVQRP
201: LEIALTGKMS KRCACFEDSQ LDQPGLEVYE GCDYHATRCK V

Best Arabidopsis Sequence Match ( AT4G14965.1 )
(BLAST)

001: MIPARRFLLS PFVGVTFIVV LVSLYFRSSF KSPQHQYQKR LFSAEELALY NGTDETLPIL LGILGSVFDV TKGKFHYGSG GGYNHFAGRD ASRAFVSGNF
101: TGDGLTDSLQ GLSSSEVKSI VDWRGFYSRT YTPVGKLVGR YYDSQGNPTK HLKGAEAKAS RGAQLMEKQK TEEAKQSNCN SRWSQDEGGE VWCDVGVPRL
201: VQRPLEIAIT GSMSKRCACF EEDQLDQSGL EIYKDCEPLA KTCRV

Arabidopsis Description

MAPR4MAPR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UY73]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.