Factsheet for Solyc04g049790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plasma membrane 4
plastid 1
endoplasmic reticulum 5
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g029160.1.1	Tomato	extracellular	31.48	51.0
KRG94134	Soybean	endoplasmic reticulum	59.88	48.5
Solyc03g025950.2.1	Tomato	plastid	51.23	36.56
Solyc06g035870.2.1	Tomato	plastid	48.77	32.92
Solyc07g044830.2.1	Tomato	endoplasmic reticulum	25.93	17.28

Protein Annotations

MapMan:11.3.2.1.4	Gene3D:3.10.120.10	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037
InterPro:IPR001199	InterPro:IPR036400	UniProt:K4BRV5	PFAM:PF00173	PANTHER:PTHR10281	PANTHER:PTHR10281:SF40
SMART:SM01117	SUPFAM:SSF55856	EnsemblPlantsGene:Solyc04g049790.2	EnsemblPlants:Solyc04g049790.2.1	TMHMM:TMhelix	UniParc:UPI00027669E5

Description

No Description!

Coordinates

chr4:+:43406100..43409541

Molecular Weight (calculated)

18090.9 Da

IEP (calculated)

4.421

GRAVY (calculated)

0.072

Length

162 amino acids

Sequence
(BLAST)

001: MATVWATTTE IIFEYTGLSA TAFFTILAMM LVTYKVVCSM FLSPDDFVPV KKQSLNLGDM TEEELRAYNG SDSEKPLLMA IRGQIYDVST SKMFYGPGSS
101: YAMFAGRDAS RALALLSFKP EDINGNLEGL GDAELQILLD WECKFMEKYD RVGQLVLKKT LT

Best Arabidopsis Sequence Match ( AT3G48890.1 )
(BLAST)

001: MVQQIWETLK ETITAYTGLS PAAFFTVLAL AFAVYQVVSG FFVSPEVHRP RSLEVQPQSE PLPPPVQLGE ITEEELKLYD GSDSKKPLLM AIKGQIYDVS
101: QSRMFYGPGG PYALFAGKDA SRALAKMSFE DQDLTGDISG LGAFELEALQ DWEYKFMSKY VKVGTIQKKD GEGKESSEPS EAKTASAEGL STNTGEEASA
201: ITHDETSRST GEKIAETTEK KDVATDDDDA AKE

Arabidopsis Description

MSBP2Membrane steroid-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Z4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.