Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G300200.1 | Wheat | endoplasmic reticulum | 94.74 | 60.47 |
| Zm00001d012510_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 68.42 | 57.55 |
| EES03803 | Sorghum | endoplasmic reticulum, golgi | 77.71 | 49.7 |
| TraesCS3B01G375100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 73.06 | 46.64 |
| KRH72830 | Soybean | endoplasmic reticulum | 72.14 | 46.05 |
| KRH17200 | Soybean | endoplasmic reticulum | 71.52 | 45.74 |
| CDX97826 | Canola | extracellular, golgi, plasma membrane | 69.97 | 44.75 |
| CDY29670 | Canola | extracellular, golgi, plasma membrane | 69.97 | 44.75 |
| PGSC0003DMT400078290 | Potato | endoplasmic reticulum, golgi | 69.66 | 44.55 |
| Bra021637.1-P | Field mustard | extracellular, golgi, plasma membrane | 69.35 | 44.36 |
| Bra018311.1-P | Field mustard | extracellular, golgi, plasma membrane | 68.73 | 43.96 |
| CDY23995 | Canola | extracellular, golgi, plasma membrane | 68.73 | 43.96 |
| CDY10741 | Canola | extracellular, golgi, plasma membrane | 68.73 | 43.96 |
| CDX84829 | Canola | extracellular, golgi, plasma membrane | 68.73 | 43.96 |
| Bra022803.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 68.42 | 43.76 |
| AT2G30490.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 68.42 | 43.76 |
| CDY02068 | Canola | extracellular, golgi, plasma membrane | 68.42 | 43.76 |
| CDY23996 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 64.4 | 43.24 |
| VIT_06s0004g08150.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 66.87 | 42.77 |
| CDX97827 | Canola | endoplasmic reticulum, golgi, plasma membrane | 65.33 | 41.78 |
| Bra021636.1-P | Field mustard | extracellular, golgi, plasma membrane | 64.4 | 41.19 |
| CDY29671 | Canola | extracellular, golgi, plasma membrane | 64.09 | 40.99 |
| TraesCS3B01G154000.1 | Wheat | golgi | 63.16 | 40.72 |
| Bra022802.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 63.16 | 40.56 |
| CDX84830 | Canola | endoplasmic reticulum, golgi, plasma membrane | 62.85 | 40.36 |
| TraesCS4B01G365100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.92 | 40.0 |
| Os01t0820000-00 | Rice | plasma membrane | 39.63 | 38.44 |
| PGSC0003DMT400078288 | Potato | cytosol | 34.67 | 35.0 |
| TraesCS7B01G299500.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 52.32 | 31.77 |
| TraesCS2B01G182500.1 | Wheat | plasma membrane | 51.7 | 31.39 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G317700.1 | EnsemblPlantsGene:TraesCS2B01G317700 | Gene3D:1.10.630.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | InterPro:IPR036396 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF56 |
| PFAM:PF00067 | PRINTS:PR00463 | SEG:seg | SUPFAM:SSF48264 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr2B:+:453178774..453183596
Molecular Weight (calculated)
36548.5 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.240
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLFLEKLL VGLFASVLVA VAVSKLRGRK LRLPPGPVPV PIFGNWLQVG DDLNHRNLAA LARRFGEIFL LRMGQRNVVV VSSPALAREV LHARGAEFGS
101: RGRNVVFDVF TDGGQDMVFA AYGDHWRTMR RVGKVVQRHH AGWEAEAAAV LMMYNNMYSL MFGRRFEGLD DPLLLRLREL NGERSRLAQS FEYNYGDFIP
201: VLRPFLRGYL KICKEVKDAR LKLYKDCFVE ERRKMLASGK ATDSHELKCG MDEILEAQRK GEINEDHVLF IVENINVADD AVGNGVGGGR VNHPETQQKL
301: RREMDRVLGA GHQVTEPDTH RLP
101: RGRNVVFDVF TDGGQDMVFA AYGDHWRTMR RVGKVVQRHH AGWEAEAAAV LMMYNNMYSL MFGRRFEGLD DPLLLRLREL NGERSRLAQS FEYNYGDFIP
201: VLRPFLRGYL KICKEVKDAR LKLYKDCFVE ERRKMLASGK ATDSHELKCG MDEILEAQRK GEINEDHVLF IVENINVADD AVGNGVGGGR VNHPETQQKL
301: RREMDRVLGA GHQVTEPDTH RLP
001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC
Arabidopsis Description
CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.