Factsheet for TraesCS5B01G330500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G336100.1	Wheat	cytosol	87.07	82.85
HORVU5Hr1G084020.3	Barley	cytosol	59.52	80.28
Zm00001d030116_P001	Maize	cytosol	78.57	76.24
AT2G21010.1	Thale cress	cytosol	47.62	54.69
TraesCS5B01G330600.1	Wheat	endoplasmic reticulum	82.99	44.12
Bra012209.1-P	Field mustard	cytosol	57.14	43.52
EER99265	Sorghum	endoplasmic reticulum	79.59	43.41
Zm00001d006238_P001	Maize	plasma membrane	79.25	43.23
OQU92056	Sorghum	endoplasmic reticulum	79.25	43.23
Os09t0538800-01	Rice	plasma membrane	78.91	43.04
Zm00001d022625_P006	Maize	cytosol, peroxisome, plastid	78.57	36.15
KRH29282	Soybean	endoplasmic reticulum	64.29	35.06
VIT_03s0038g02330.t01	Wine grape	endoplasmic reticulum	63.95	34.88
KRH51399	Soybean	endoplasmic reticulum, extracellular, plasma membrane	63.27	34.7
VIT_18s0001g14630.t01	Wine grape	endoplasmic reticulum, extracellular	63.27	34.51
KRH24304	Soybean	endoplasmic reticulum	63.27	34.51
KRH05967	Soybean	endoplasmic reticulum, extracellular	60.88	33.27
PGSC0003DMT400015793	Potato	endoplasmic reticulum	60.88	33.21
Solyc01g111520.2.1	Tomato	nucleus	60.54	33.02
Solyc12g089330.1.1	Tomato	endoplasmic reticulum, extracellular	58.84	32.95
KRH17448	Soybean	mitochondrion	60.2	32.9
CDY43415	Canola	endoplasmic reticulum, extracellular	59.86	32.71
PGSC0003DMT400075422	Potato	endoplasmic reticulum, extracellular	58.84	32.1
AT1G20080.3	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	57.82	31.66
CDY62938	Canola	endoplasmic reticulum, extracellular	58.84	31.51
CDY57593	Canola	endoplasmic reticulum, extracellular	58.5	31.16
CDY54339	Canola	endoplasmic reticulum, extracellular	58.16	31.15
CDY13846	Canola	endoplasmic reticulum, extracellular	56.46	30.68
Bra031157.1-P	Field mustard	endoplasmic reticulum, extracellular	56.46	30.68
CDX81995	Canola	endoplasmic reticulum, extracellular	56.12	30.5
Bra016478.1-P	Field mustard	endoplasmic reticulum, extracellular	50.34	29.08
AT2G20990.3	Thale cress	endoplasmic reticulum, extracellular	55.78	28.32
TraesCS7B01G347000.3	Wheat	extracellular, golgi	48.64	24.78
AT2G21040.1	Thale cress	cytosol	21.09	23.75
Os01t0819200-00	Rice	endoplasmic reticulum, extracellular	21.77	20.98
TraesCS2B01G545700.3	Wheat	endoplasmic reticulum, extracellular, plastid	29.25	15.09
TraesCS2B01G262400.1	Wheat	plasma membrane	23.13	13.39
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	21.77	12.57

Protein Annotations

EnsemblPlants:TraesCS5B01G330500.1	EnsemblPlantsGene:TraesCS5B01G330500	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR10774	PANTHER:PTHR10774:SF50	PFAM:PF00168	PFscan:PS50004	PRINTS:PR00360
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	TIGR:cd00030	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:-:514853624..514855101

Molecular Weight (calculated)

33394.2 Da

IEP (calculated)

9.189

GRAVY (calculated)

-0.725

Length

294 amino acids

Sequence
(BLAST)

001: MDPSKASKRP VGILFVKVVR AQNLEKKGLL GSKSDPYVKL KMSDDRLPSK KTRVKRSNLN PEWNEEFKFV VIDLENQSLD VNVFHRAQVG KHVKMGMNKV
101: LLKELAPEET QVSTLNLLKT MDPNDVQNEK PRGQITLEVT YKPFKQEEDM EEESMDGTEE AQKALDNGPP GGGLLLVVVH EAQDLEGKHH TNPYAKIIFK
201: GEEKKTKVIK KNRDPRWEDE FEFACEEPPT NDKLHVEVLS KPGKIGGILH GKETLGFIYI ALAGVISNRR TNEKYRLIGS KNGQIQIELQ WRTS

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.