Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 96.65 | 94.2 |
| AT1G20080.3 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 93.12 | 93.3 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 92.01 | 90.16 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 91.08 | 89.25 |
| VIT_18s0001g14630.t01 | Wine grape | endoplasmic reticulum, extracellular | 76.02 | 75.88 |
| KRH17448 | Soybean | mitochondrion | 73.61 | 73.61 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 73.42 | 73.42 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 71.93 | 71.93 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 70.07 | 70.07 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 68.96 | 69.74 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 68.03 | 67.9 |
| Zm00001d006238_P001 | Maize | plasma membrane | 68.03 | 67.9 |
| PGSC0003DMT400075422 | Potato | endoplasmic reticulum, extracellular | 67.84 | 67.72 |
| OQU92056 | Sorghum | endoplasmic reticulum | 67.84 | 67.72 |
| EER99265 | Sorghum | endoplasmic reticulum | 67.66 | 67.53 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 67.47 | 67.1 |
| Solyc12g089330.1.1 | Tomato | endoplasmic reticulum, extracellular | 65.24 | 66.86 |
| TraesCS5A01G330400.1 | Wheat | golgi | 66.91 | 66.79 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 66.91 | 66.79 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 67.1 | 66.73 |
| Zm00001d030116_P001 | Maize | cytosol | 37.55 | 66.67 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 66.91 | 65.1 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 34.76 | 60.52 |
| HORVU5Hr1G084020.3 | Barley | cytosol | 24.35 | 60.09 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 59.11 | 59.89 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 32.71 | 59.86 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 66.54 | 56.02 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.81 | 49.26 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 49.81 | 48.99 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 31.23 | 30.05 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 30.3 | 29.42 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 31.23 | 29.22 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 30.86 | 29.12 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 30.3 | 29.0 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 31.04 | 28.94 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 24.72 | 26.34 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 22.49 | 25.53 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.3 | 25.32 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.3 | 25.32 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:5.8.1.2 | GO:A0A078HY10 | UniProt:A0A078HY10 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlants:CDY43415 | ProteinID:CDY43415 | ProteinID:CDY43415.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00076627001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 | SMART:SM00239 |
| InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EEBDA6 | SEG:seg |
Description
BnaC07g14820DBnaC07g14820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY10]
Coordinates
chrLK032556:-:65959..69171
Molecular Weight (calculated)
60804.0 Da
IEP (calculated)
5.445
GRAVY (calculated)
-0.233
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTISTILGT FGFGFGTTVG IVIGYYLFIY HQSTDDPEIK PLVELDSETI ATMFPEIPLW VKNPDFDRID WLNKLIGHMW PYMNKAICNM TKSIAKPIIA
101: EQIPNYKIDS VEFEMLTLGS LPPTFQGMKV YATDDKEIIM ELSVKWAGNP NILLAAKAFG FKATVQVVDL QAFATPRITL KPLVPSFPCC ANIFVSLMDK
201: PQVDFGLKLL GADVMAIPGL YRFVLELIKD QVANMYLWPK TLTVQIMDPS KAMEKPVGLL NVKVIKAIKL KKKDLLGGSD PYVKLTLSGD KVPGKKTVVK
301: HSNLNPEWNE EFDLVVKEPE SQELQLIVYD WEQVGKHDKI GMNVIQLKDL TPEEPKLMTL ELLKSMEPNE PVSEKSRGQL VVEVEYKPFK EDDIPENLDD
401: PNAVEKAPEG TPSGGGLLVV IVHEAEDLEG KYHTNPSVRL MFKGEERKTK RVKKNREPRW DEDFQFPLDE PPINDKLHVE VISTTSRIGL NMHPKETLGY
501: VVINLGDVVS NRRINDKYHL IDSKNGRIQI ELQWRTSS
101: EQIPNYKIDS VEFEMLTLGS LPPTFQGMKV YATDDKEIIM ELSVKWAGNP NILLAAKAFG FKATVQVVDL QAFATPRITL KPLVPSFPCC ANIFVSLMDK
201: PQVDFGLKLL GADVMAIPGL YRFVLELIKD QVANMYLWPK TLTVQIMDPS KAMEKPVGLL NVKVIKAIKL KKKDLLGGSD PYVKLTLSGD KVPGKKTVVK
301: HSNLNPEWNE EFDLVVKEPE SQELQLIVYD WEQVGKHDKI GMNVIQLKDL TPEEPKLMTL ELLKSMEPNE PVSEKSRGQL VVEVEYKPFK EDDIPENLDD
401: PNAVEKAPEG TPSGGGLLVV IVHEAEDLEG KYHTNPSVRL MFKGEERKTK RVKKNREPRW DEDFQFPLDE PPINDKLHVE VISTTSRIGL NMHPKETLGY
501: VVINLGDVVS NRRINDKYHL IDSKNGRIQI ELQWRTSS
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.