CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023307.1-P	Field mustard	endoplasmic reticulum	99.82	98.4
CDY51108	Canola	endoplasmic reticulum, extracellular, plastid	98.74	97.33
CDY47278	Canola	endoplasmic reticulum, extracellular	71.48	70.84
PGSC0003DMT400036226	Potato	endoplasmic reticulum	70.22	70.47
VIT_04s0008g05740.t01	Wine grape	endoplasmic reticulum	72.38	70.35
KRH52409	Soybean	endoplasmic reticulum, extracellular	72.38	69.86
CDY15543	Canola	endoplasmic reticulum, extracellular	71.66	69.65
GSMUA_Achr1P26040_001	Banana	endoplasmic reticulum, golgi	69.49	68.87
CDY10116	Canola	endoplasmic reticulum, extracellular	70.94	68.35
CDX86575	Canola	endoplasmic reticulum, extracellular	70.94	68.11
GSMUA_Achr7P05380_001	Banana	endoplasmic reticulum	70.76	67.24
Solyc08g021940.1.1	Tomato	extracellular, plasma membrane	34.3	66.67
EES11541	Sorghum	extracellular, golgi	66.61	64.06
Zm00001d002090_P001	Maize	endoplasmic reticulum, extracellular, plastid	66.61	64.06
TraesCS2B01G545700.3	Wheat	endoplasmic reticulum, extracellular, plastid	65.88	64.04
TraesCS2D01G518800.1	Wheat	endoplasmic reticulum, extracellular, plastid	65.7	63.86
TraesCS2A01G517200.1	Wheat	endoplasmic reticulum, extracellular, plastid	65.52	63.68
HORVU2Hr1G114590.1	Barley	endoplasmic reticulum, extracellular, plastid	65.34	63.51
GSMUA_Achr3P19840_001	Banana	endoplasmic reticulum, golgi, plastid	65.52	60.8
CDY45675	Canola	endoplasmic reticulum, extracellular	33.39	36.63
CDY42483	Canola	endoplasmic reticulum, extracellular	30.87	36.08
CDX89094	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.87	36.08
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.32	35.44
CDX70250	Canola	endoplasmic reticulum, extracellular	30.87	31.26
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.51	31.07
CDX81995	Canola	endoplasmic reticulum, extracellular	30.32	31.05
CDY13846	Canola	endoplasmic reticulum, extracellular	30.14	30.87
CDY43415	Canola	endoplasmic reticulum, extracellular	29.42	30.3
CDY62938	Canola	endoplasmic reticulum, extracellular	29.96	30.24
CDY54339	Canola	endoplasmic reticulum, extracellular	29.6	29.87
CDY57593	Canola	endoplasmic reticulum, extracellular	29.06	29.17

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078DBM5	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDX85729
ProteinID:CDX85729	ProteinID:CDX85729.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	EnsemblPlantsGene:GSBRNA2T00143479001
InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360
PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF167	SMART:SM00239	InterPro:SMP_LBD
SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI0004EF2255	SEG:seg	:

Description

BnaA02g00840D

Coordinates

chrLK031842:-:1451471..1454584

Molecular Weight (calculated)

61810.0 Da

IEP (calculated)

5.063

GRAVY (calculated)

-0.001

Length

554 amino acids

Sequence
(BLAST)

001: MGFLFGLFIG IAVSIGLVVA FARYSNVRST RRAELARTIA AFARMTVQDS RKLLPGEFYP SWVLNWLNLE LEKIWPYVNE AASELIRSSV EPVLEQYTPA
101: MIASLKFSKL TLGTVAPQFT GVSILENESG PTGITMELEM QWDGNPKIVL DVKTLLGVAL PIEVKNVGFT GVFRLIFKPL VDEFPCFGAL SYSLREKKGL
201: DFTLKVIGGE LTSIPGISDA LEETILDAIE DSITWPVRKI IPILPGDYSD LELKPVGTLD VKLVQAKDLS NKDLIGKSDP YAVVFIRPLP NKTKKTKTIS
301: NSLNPIWNEH FEFVVEDVST QHLTVRVFDD EGVGSSQLIG AAQVPLNELE PGKVKDIWLK LVKDLVVQRD TKNRGQVQLE LLYCPLGKES GFKNPFNPNY
401: SLTILEKVLK PESEDSDATD KTDVIVRGVL SVTVVAAEDL PAVDFMGKAD PFVVITLKKS EAKSKTRVVP DSLNPVWNQT FDFVVEDALH DLLILEVWDH
501: DKFGKDKIGR VIMTLTRVML EGEFQEWYEL DGAKSGKLCI HLKWTPRLKL RDSS

Best Arabidopsis Sequence Match ( AT1G05500.1 )
(BLAST)

001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS

Arabidopsis Description

SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.