Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 99.37 | 99.37 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 96.84 | 96.84 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 100.0 | 93.86 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 95.57 | 89.7 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 95.99 | 89.22 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 79.54 | 73.49 |
| Solyc01g094030.2.1 | Tomato | plastid | 76.16 | 71.49 |
| PGSC0003DMT400035570 | Potato | cytosol | 55.49 | 70.32 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 77.64 | 70.23 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 72.15 | 69.09 |
| KRH40562 | Soybean | endoplasmic reticulum | 76.58 | 67.85 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 76.58 | 67.85 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 76.79 | 66.79 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 70.04 | 66.53 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 65.61 | 65.47 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.24 | 65.15 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 67.3 | 62.8 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 67.3 | 62.8 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 67.09 | 62.6 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 66.88 | 62.4 |
| Os07t0409100-01 | Rice | plasma membrane | 66.88 | 61.55 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 69.2 | 61.08 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 64.77 | 60.91 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 32.49 | 59.92 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 64.35 | 59.69 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.29 | 58.94 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 64.35 | 58.77 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 66.24 | 58.69 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.71 | 58.64 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.08 | 58.06 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 61.81 | 57.23 |
| KRH55269 | Soybean | cytosol, plasma membrane | 31.43 | 56.87 |
| Os03t0251600-00 | Rice | plasma membrane | 61.39 | 55.11 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 38.82 | 52.12 |
| AT3G61030.1 | Thale cress | mitochondrion | 55.7 | 51.87 |
| AT3G60950.1 | Thale cress | mitochondrion | 56.96 | 43.06 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 36.5 | 30.95 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 36.08 | 30.87 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 36.08 | 30.43 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 36.71 | 30.26 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 36.29 | 30.18 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 36.08 | 29.64 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 27.85 | 24.13 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 27.43 | 23.9 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 25.32 | 22.3 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 25.53 | 22.04 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 25.53 | 22.04 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 25.53 | 21.92 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 24.68 | 21.63 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 24.47 | 21.44 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | GO:A0A078DKD9 | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDX89094 |
| ProteinID:CDX89094 | ProteinID:CDX89094.1 | InterPro:CLB_plant | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00149227001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 |
| PFAM:PF00168 | PFAM:PF17047 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 |
| SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EE2380 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g00920D
Coordinates
chrLK031857:+:1011944..1014851
Molecular Weight (calculated)
51133.6 Da
IEP (calculated)
6.207
GRAVY (calculated)
0.034
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISGILFG IIFGVALMAG WSRMMSHRSS KRVAKAVDMK LLGSLSREDL MKICGDNFPQ WISFPAFEQV KWLNKLLGKM WPFIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQITM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD SIVKDMLQWP HRIVVPIGGI PVDISELELK PQGKLIYKTK AIENNLNPVW DQTFELIAED KETQSLTVEV
301: FDKDVGQDER LGLVKLPLSS LEAGVTKEME LNLLSSLDTL KVKDKKDRGS ITLKVHYHEF NKEEQMAALE EEKKIMEERK RLKDAGMIGS TMDAVGSGLG
401: AGVGMVGTGI GAGVGLVGTG VSSGVGMVGS GFGAVGSGLS KAGRFMGRTI TGQTSKRSGS STPVNSETDG SKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQITM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD SIVKDMLQWP HRIVVPIGGI PVDISELELK PQGKLIYKTK AIENNLNPVW DQTFELIAED KETQSLTVEV
301: FDKDVGQDER LGLVKLPLSS LEAGVTKEME LNLLSSLDTL KVKDKKDRGS ITLKVHYHEF NKEEQMAALE EEKKIMEERK RLKDAGMIGS TMDAVGSGLG
401: AGVGMVGTGI GAGVGLVGTG VSSGVGMVGS GFGAVGSGLS KAGRFMGRTI TGQTSKRSGS STPVNSETDG SKQQ
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.