Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96263 | Sorghum | mitochondrion, plasma membrane | 89.72 | 94.49 |
| Os07t0409100-01 | Rice | plasma membrane | 81.5 | 84.66 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 79.44 | 83.66 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 79.25 | 83.46 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 79.25 | 83.46 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 68.41 | 73.35 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 48.22 | 73.09 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 67.29 | 68.7 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 64.67 | 67.45 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 67.1 | 67.1 |
| Solyc01g094030.2.1 | Tomato | plastid | 62.8 | 66.53 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 62.8 | 66.53 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 63.18 | 66.27 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 58.69 | 66.24 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.69 | 66.24 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 62.43 | 66.14 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.5 | 66.03 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 62.06 | 65.74 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 65.98 | 65.74 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 58.88 | 65.35 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 57.94 | 65.26 |
| KRH40562 | Soybean | endoplasmic reticulum | 65.23 | 65.23 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 60.0 | 64.85 |
| PGSC0003DMT400035570 | Potato | cytosol | 45.05 | 64.44 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 64.86 | 63.67 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 61.5 | 63.39 |
| KRH55269 | Soybean | cytosol, plasma membrane | 28.97 | 59.16 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.22 | 58.75 |
| AT3G61030.1 | Thale cress | mitochondrion | 38.5 | 40.47 |
| AT3G60950.1 | Thale cress | mitochondrion | 39.07 | 33.33 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 34.77 | 32.29 |
| Zm00001d007034_P008 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 33.83 | 30.83 |
| Zm00001d030116_P001 | Maize | cytosol | 14.21 | 25.08 |
| Zm00001d006238_P001 | Maize | plasma membrane | 24.86 | 24.68 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 21.12 | 22.74 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 24.49 | 20.5 |
Protein Annotations
| EntrezGene:100384434 | Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A1D6HXM2 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:CLB_plant | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 |
| InterPro:IPR031468 | InterPro:IPR035892 | ProteinID:ONM52970.1 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 | SMART:SM00239 | InterPro:SMP_LBD |
| SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI00084443FF | EnsemblPlantsGene:Zm00001d019472 | EnsemblPlants:Zm00001d019472_P005 |
| EnsemblPlants:Zm00001d019472_T005 | SEG:seg | : | : | : | : |
Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Coordinates
chr7:+:35446315..35461015
Molecular Weight (calculated)
58670.6 Da
IEP (calculated)
9.459
GRAVY (calculated)
-0.018
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISGMMMG VIVGVAIMAG WSRVMRRRST KRIAKAADIK VLGSLSRDDL RKLCGDNFPE WISFPQFEQV KWLNKHLSKL WPFVVEAATV VVKESVEPLL
101: DDYRPPGIKS LKFSKFSLGN VSPKIEGIRI QNLQPGQIIM DIDFRWGGNP SIILAVDAVV ASLPIQLKDL QVYTVIRVIF QLSEDIPCIS AVVVALLADA
201: KIFYKACFQN RAISNIKRGF SHLFLLTGFF VLQPEPKIQY TLKAIGGSLT AVPGLSDMID DTVDSIVSDM LLWPHRHVVK LGVNVDTSDL ELKPQGRLSV
301: TVVKATSLRN KEMIGKSDPY VKLYVRPMFK VKTKVIDDDL NPEWNETFDL IVEDKETQSV IFEVYDEDKL QQDKRLGVAK LAVNTLESEI TQDATLKLLH
401: SLDPIKNKDT KDRGTLHLKV KYHPFTKEEQ LEALEMEKQA IEERKRLKEA GIIGSTMDAV GSGVGFVGTG IGAGLGFVGS GIGAGAGLVT SGIGAVSSGL
501: GKAGKFMGRT VTGPFSMSRK NGSSSTAPQH DQPSA
101: DDYRPPGIKS LKFSKFSLGN VSPKIEGIRI QNLQPGQIIM DIDFRWGGNP SIILAVDAVV ASLPIQLKDL QVYTVIRVIF QLSEDIPCIS AVVVALLADA
201: KIFYKACFQN RAISNIKRGF SHLFLLTGFF VLQPEPKIQY TLKAIGGSLT AVPGLSDMID DTVDSIVSDM LLWPHRHVVK LGVNVDTSDL ELKPQGRLSV
301: TVVKATSLRN KEMIGKSDPY VKLYVRPMFK VKTKVIDDDL NPEWNETFDL IVEDKETQSV IFEVYDEDKL QQDKRLGVAK LAVNTLESEI TQDATLKLLH
401: SLDPIKNKDT KDRGTLHLKV KYHPFTKEEQ LEALEMEKQA IEERKRLKEA GIIGSTMDAV GSGVGFVGTG IGAGLGFVGS GIGAGAGLVT SGIGAVSSGL
501: GKAGKFMGRT VTGPFSMSRK NGSSSTAPQH DQPSA
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.