Factsheet for HORVU2Hr1G052430.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G262400.1	Wheat	plasma membrane	88.67	61.61
TraesCS2D01G242600.1	Wheat	plasma membrane	88.67	61.61
TraesCS2A01G244800.1	Wheat	plasma membrane	88.39	61.42
KRH55269	Soybean	cytosol, plasma membrane	45.33	61.07
PGSC0003DMT400035570	Potato	cytosol	62.04	58.56
Os07t0409100-01	Rice	plasma membrane	77.62	53.2
EER96263	Sorghum	mitochondrion, plasma membrane	76.49	53.15
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	36.83	50.58
Zm00001d019472_P005	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	73.09	48.22
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	64.02	45.29
KRH48321	Soybean	endoplasmic reticulum, mitochondrion	64.02	43.13
KRH65210	Soybean	endoplasmic reticulum, mitochondrion	64.31	42.43
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	61.47	42.3
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	58.64	41.82
Bra014457.1-P	Field mustard	endoplasmic reticulum, extracellular	58.92	41.19
AT3G61050.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	59.49	41.18
Solyc01g094030.2.1	Tomato	plastid	58.64	40.99
Bra003434.1-P	Field mustard	endoplasmic reticulum, extracellular	58.36	40.79
CDY45675	Canola	endoplasmic reticulum, extracellular	58.07	40.59
Solyc10g017590.2.1	Tomato	mitochondrion	54.11	40.21
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	60.91	40.04
KRH40562	Soybean	endoplasmic reticulum	60.62	40.0
KRH00619	Soybean	mitochondrion, plasma membrane	60.62	39.27
CDY42483	Canola	endoplasmic reticulum, extracellular	52.41	39.03
CDX89094	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.12	38.82
PGSC0003DMT400026606	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	52.97	38.8
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.56	38.4
HORVU4Hr1G062820.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	52.69	36.33
AT3G61030.1	Thale cress	mitochondrion	32.86	22.79
HORVU6Hr1G017900.14	Barley	endoplasmic reticulum, extracellular, plasma membrane	33.43	20.17
HORVU2Hr1G114590.1	Barley	endoplasmic reticulum, extracellular, plastid	31.44	19.47
AT3G60950.1	Thale cress	mitochondrion	34.28	19.3
HORVU5Hr1G084010.1	Barley	endoplasmic reticulum, extracellular	24.08	15.77
HORVU7Hr1G101310.22	Barley	extracellular, golgi	21.25	13.91
HORVU5Hr1G084020.3	Barley	cytosol	7.65	12.39

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	UniProt:A0A287I0C8	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:CLB_plant
ncoils:Coil	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G052430	EnsemblPlants:HORVU2Hr1G052430.2	InterPro:IPR000008	InterPro:IPR035892
PFAM:PF00168	PRINTS:PR00360	PFscan:PS50004	PANTHER:PTHR10774	PANTHER:PTHR10774:SF51	SMART:SM00239
SUPFAM:SSF49562	UniParc:UPI000B488B31	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:313679362..313833094

Molecular Weight (calculated)

37896.0 Da

IEP (calculated)

7.441

GRAVY (calculated)

-0.085

Length

353 amino acids

Sequence
(BLAST)

001: MLELHHCLFR AQGSPGLYRC SCCISTVRRD SLHLCFCCCS PRRGIEPKIQ YTLKAVGGSL TAIPGLSDMI DDTVNSIVND MLQWPHRVVV PLGVNVDTSE
101: LELKPEGKLS VTVVKAISLK NKELIGKSDP YVTLYVRPMF KVKTKVIDDN LNPEWNETFE LIVEDKETQS VIFEVYDEDN LQQDKRLGVA KLAVNNIVPE
201: IPSEITLKLM QSLDSLKIKD YRDRGSLHLK VMYHPFTKEE QLEALESEKK AIEERKRLKE AGVIGSTMDA LGGAASLVGS GVGFVGTGVA GGVGLVGSGL
301: GAGAGLVGSG IGAVGSGLGK AGKFMGRTVT GHLGISRKSG SSSTVPQPDQ PSA

Best Arabidopsis Sequence Match ( AT3G61050.1 )
(BLAST)

001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ

Arabidopsis Description

NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.