Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 85.19 | 83.4 |
| Solyc01g094030.2.1 | Tomato | plastid | 81.87 | 83.17 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 85.77 | 82.24 |
| PGSC0003DMT400035570 | Potato | cytosol | 59.45 | 81.55 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.49 | 79.54 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 76.41 | 79.19 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.1 | 79.11 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 73.1 | 79.11 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.58 | 78.81 |
| KRH40562 | Soybean | endoplasmic reticulum | 81.87 | 78.5 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.0 | 78.22 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 76.8 | 78.02 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 82.85 | 77.98 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 75.83 | 77.96 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 71.93 | 77.68 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 77.19 | 77.65 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 71.93 | 76.56 |
| KRH55269 | Soybean | cytosol, plasma membrane | 37.23 | 72.9 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 35.87 | 71.6 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 70.76 | 71.46 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 70.57 | 71.26 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 70.57 | 71.26 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 73.88 | 70.58 |
| Os07t0409100-01 | Rice | plasma membrane | 70.76 | 70.49 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 69.59 | 70.28 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 67.06 | 68.25 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 65.3 | 65.56 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 66.08 | 65.32 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 67.45 | 64.67 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 64.13 | 64.64 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.94 | 63.69 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 63.55 | 63.67 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.35 | 63.11 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 42.3 | 61.47 |
| Os03t0251600-00 | Rice | plasma membrane | 62.57 | 60.8 |
| AT3G61030.1 | Thale cress | mitochondrion | 45.22 | 45.58 |
| AT3G60950.1 | Thale cress | mitochondrion | 46.39 | 37.96 |
| VIT_09s0018g01580.t01 | Wine grape | cytosol | 6.24 | 34.78 |
| VIT_18s0001g14590.t01 | Wine grape | cytosol | 6.24 | 34.78 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 35.67 | 32.28 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 35.67 | 32.11 |
| VIT_10s0003g03240.t01 | Wine grape | mitochondrion | 7.02 | 29.75 |
| VIT_12s0055g01250.t01 | Wine grape | cytosol, mitochondrion | 7.02 | 29.75 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 26.9 | 25.37 |
| VIT_08s0040g01740.t01 | Wine grape | endoplasmic reticulum, extracellular | 25.73 | 24.13 |
| VIT_03s0038g02330.t01 | Wine grape | endoplasmic reticulum | 25.34 | 24.12 |
| VIT_18s0001g14630.t01 | Wine grape | endoplasmic reticulum, extracellular | 25.15 | 23.93 |
Protein Annotations
| EntrezGene:100265985 | wikigene:100265985 | Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf |
| ProteinID:CCB61362 | ProteinID:CCB61362.1 | InterPro:CLB_plant | ncoils:Coil | UniProt:F6I345 | EMBL:FN596739 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | EntrezGene:LOC100265985 | wikigene:LOC100265985 |
| PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 |
| PANTHER:PTHR10774:SF51 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TIGR:TC54364 |
| TMHMM:TMhelix | UniParc:UPI00015CAF07 | ArrayExpress:VIT_15s0048g01410 | EnsemblPlantsGene:VIT_15s0048g01410 | EnsemblPlants:VIT_15s0048g01410.t01 | unigene:Vvi.10815 |
| RefSeq:XP_002276807 | RefSeq:XP_002276807.1 | RefSeq:XP_010661593.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr15:-:15541609..15564871
Molecular Weight (calculated)
55636.6 Da
IEP (calculated)
8.907
GRAVY (calculated)
0.063
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISGILMG TIFGIALMAG WVHMMRYRSI KRVAKAVDIK LLGSLNREDL KKICGDNFPE WISFPVYEQV KWLNKQLTKL WPFVADAATL VIRESVEPLL
101: EDYRPPGITS LKFSKLSLGN VAPKIEGIRV QSLKKGQIIM DIDLRWGGDP SIILAVEAAL VASIPIQLKD LQVFTVARVI FQLAEEIPCI SAVIVALLSE
201: PKPRIDYTLK AVGGSLTALP GISDMIDDTV NTIITDMLQW PHRIVVPIGG MPVDTSELEL KPQGKLTLTI VKANDLKNME MIGKSDPYVV VHIRPLFKIK
301: TKVIENNLNP VWNQTFELIA EDKETQSLIL EVIDKDITQD KRLGIAKLPL NDLEAENPKE IELRLLPSLD MLKIKDKKDR GTITIKVLYH AFNKEEQMAA
401: LEEEKRILEE RKKLKEAGVI GSTMDALDGA ASLVGSGIGL VGSGVGAGVG LVGTGLGAGV GIVGSGLGAV GSGLSKAGKF MGRSITGQSS SNKRNGSTTP
501: VNNTQENGGV KPT
101: EDYRPPGITS LKFSKLSLGN VAPKIEGIRV QSLKKGQIIM DIDLRWGGDP SIILAVEAAL VASIPIQLKD LQVFTVARVI FQLAEEIPCI SAVIVALLSE
201: PKPRIDYTLK AVGGSLTALP GISDMIDDTV NTIITDMLQW PHRIVVPIGG MPVDTSELEL KPQGKLTLTI VKANDLKNME MIGKSDPYVV VHIRPLFKIK
301: TKVIENNLNP VWNQTFELIA EDKETQSLIL EVIDKDITQD KRLGIAKLPL NDLEAENPKE IELRLLPSLD MLKIKDKKDR GTITIKVLYH AFNKEEQMAA
401: LEEEKRILEE RKKLKEAGVI GSTMDALDGA ASLVGSGIGL VGSGVGAGVG LVGTGLGAGV GIVGSGLGAV GSGLSKAGKF MGRSITGQSS SNKRNGSTTP
501: VNNTQENGGV KPT
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.