Factsheet for VIT_09s0018g01580.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g14590.t01	Wine grape	cytosol	94.57	94.57
VIT_10s0003g03240.t01	Wine grape	mitochondrion	94.57	71.9
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	93.48	71.07
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	95.65	16.09
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	73.91	14.44
VIT_13s0019g04450.t01	Wine grape	endoplasmic reticulum, extracellular	76.09	12.87
Zm00001d014499_P004	Maize	endoplasmic reticulum, extracellular	67.39	12.47
EER88839	Sorghum	endoplasmic reticulum, extracellular	66.3	11.38
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	66.3	11.3
Solyc09g007860.2.1	Tomato	endoplasmic reticulum	66.3	11.19
PGSC0003DMT400055528	Potato	mitochondrion	66.3	11.19
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	65.22	11.13
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	65.22	11.13
HORVU7Hr1G101310.22	Barley	extracellular, golgi	65.22	11.13
TraesCS7B01G347000.3	Wheat	extracellular, golgi	66.3	10.57
VIT_18s0001g14630.t01	Wine grape	endoplasmic reticulum, extracellular	59.78	10.2
VIT_03s0038g02330.t01	Wine grape	endoplasmic reticulum	56.52	9.65
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	34.78	6.24
VIT_11s0118g00230.t01	Wine grape	endoplasmic reticulum, extracellular	36.96	6.0
VIT_04s0008g05740.t01	Wine grape	endoplasmic reticulum	36.96	5.96
GSMUA_Achr4P18210_001	Banana	extracellular, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CBI25255	ProteinID:CBI25255.3
UniProt:D7T423	EMBL:FN595513	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PRINTS:PR00360	PFscan:PS50004
PANTHER:PTHR10774	PANTHER:PTHR10774:SF62	SUPFAM:SSF49562	UniParc:UPI00015CAAC8	ArrayExpress:VIT_09s0018g01580	EnsemblPlantsGene:VIT_09s0018g01580
EnsemblPlants:VIT_09s0018g01580.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:18729892..18730482

Molecular Weight (calculated)

10364.1 Da

IEP (calculated)

9.682

GRAVY (calculated)

-0.013

Length

92 amino acids

Sequence
(BLAST)

1: MPILDALVAP IKKPVGLLHV KVVRACKLLK MDILGASDPY VKLSLSGERL PAKKTSIKMK TMDPEWNEDF KLIVKDPKSQ VLQLHVCDWE NV

Best Arabidopsis Sequence Match ( AT5G04220.1 )
(BLAST)

001: MILLSETIKR QVSSMYHWPQ VLEIPILDSS TASVKKPVGL LHVSILRARN LLKKDLLGTS DPYVKLSLTG EKLPAKKTTI KKRNLNPEWN EHFKLIVKDP
101: NSQVLQLEVF DWDKVGGHDR LGMQMIPLQK INPGERKEFN LDLIKNSNVV MDSGDKKKRG RLEVDLRYVP FREESIKRRK ESREEKSSED DDFLSQAGLL
201: SVAVQSAKDV EGKKKHSNPY AVVLFRGEKK KTKMLKKTRD PRWNEEFQFT LEEPPVKESI RVEVMSKGTG FHFRSKEELG HVDINLDDVV DNGRINQKYH
301: LINSRNGIIH IEIRWTTS

Arabidopsis Description

SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.