Factsheet for HORVU7Hr1G101310.22

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	95.55	95.55
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	94.62	94.62
TraesCS7B01G347000.3	Wheat	extracellular, golgi	94.81	88.56
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	81.26	81.11
EER88839	Sorghum	endoplasmic reticulum, extracellular	79.96	80.41
Zm00001d014499_P004	Maize	endoplasmic reticulum, extracellular	66.98	72.64
VIT_18s0001g14590.t01	Wine grape	cytosol	11.32	66.3
VIT_09s0018g01580.t01	Wine grape	cytosol	11.13	65.22
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	53.99	61.78
VIT_10s0003g03240.t01	Wine grape	mitochondrion	13.54	60.33
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	13.54	60.33
VIT_13s0019g04450.t01	Wine grape	endoplasmic reticulum, extracellular	57.88	57.35
KRG91923	Soybean	endoplasmic reticulum, extracellular, plasma membrane	56.4	55.78
KRH34856	Soybean	extracellular	56.03	55.41
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	53.8	53.7
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	54.17	53.38
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	52.88	52.39
PGSC0003DMT400055528	Potato	mitochondrion	52.88	52.29
Solyc09g007860.2.1	Tomato	endoplasmic reticulum	52.69	52.11
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.5	52.02
CDX70250	Canola	endoplasmic reticulum, extracellular	52.69	51.92
HORVU5Hr1G084010.1	Barley	endoplasmic reticulum, extracellular	51.21	51.21
KRH15981	Soybean	extracellular	12.99	46.36
HORVU5Hr1G084020.3	Barley	cytosol	17.07	42.2
KRG95324	Soybean	extracellular, plasma membrane	7.79	34.71
HORVU6Hr1G017900.14	Barley	endoplasmic reticulum, extracellular, plasma membrane	29.5	27.18
HORVU2Hr1G114590.1	Barley	endoplasmic reticulum, extracellular, plastid	27.83	26.32
HORVU4Hr1G062820.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	24.49	25.78
HORVU2Hr1G052430.2	Barley	cytosol	13.91	21.25

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	UniProt:A0A287XLF2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008289
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU7Hr1G101310	EnsemblPlants:HORVU7Hr1G101310.22	InterPro:IPR000008	InterPro:IPR031468
InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360	PFscan:PS50004	PFscan:PS51847
PANTHER:PTHR10774	PANTHER:PTHR10774:SF62	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP
TMHMM:TMhelix	UniParc:UPI000B463AFF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:608808025..608815995

Molecular Weight (calculated)

61634.0 Da

IEP (calculated)

9.575

GRAVY (calculated)

-0.172

Length

539 amino acids

Sequence
(BLAST)

001: MGLLGGLVGF VLGLPLGLAA ACLVYLRFFA PRRRLQDPVV RPLRDLDNET LQTMVHDIPL WVKYPDYERI DWMNKFICDM WPFLDKAICK IIRTVAKPIC
101: DQYVGKYGIE SIEFGNLTLG ALPPTLQGIK VFEMREKELV IQPVIRWASI ANVIVNVKVH SFKLSVQLLD LHMMLTPRVT LKPLVPSFPC FASLCVSLME
201: KPDVDFGLKL LGGDVMAIPG LYRLSQDQIS KQIAILYHWP KVIEVPILDG ASGATKKPVG ILQVKVIRAM NLPKMDLLGK SDPYVKLRLS GERLPSKKTS
301: VKMSNLNPEW NEHFRLVVKD PETQVLELQM FDWEKVKMHD KMGVQVIPLR LLTPCESKLF TLDLLRSMNP NDQQNKKNRG KLVVELTFDP FREENNTSPL
401: ISDGEGNISL KRDVPDGGGV LLVSVENAED VEGKRHTNPY AVVLFRGEKR ETKVMRKARD PRWNEEFQFV VDEAPMDEKI HIEIRSRRRR LLPFRNQESL
501: GHVNINLVDV VNNGRINEKY HLINSRNGKL QLEIKWNTV

Best Arabidopsis Sequence Match ( AT5G04220.2 )
(BLAST)

001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS

Arabidopsis Description

SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.