Factsheet for Solyc09g007860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055528	Potato	mitochondrion	96.15	96.15
VIT_18s0001g14590.t01	Wine grape	cytosol	11.56	68.48
VIT_09s0018g01580.t01	Wine grape	cytosol	11.19	66.3
VIT_10s0003g03240.t01	Wine grape	mitochondrion	14.5	65.29
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	14.31	64.46
KRH34856	Soybean	extracellular	62.2	62.2
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	61.83	61.61
KRG91923	Soybean	endoplasmic reticulum, extracellular, plasma membrane	61.1	61.1
GSMUA_Achr4P18210_001	Banana	extracellular, plasma membrane	15.78	60.56
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	58.35	58.89
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	57.61	57.72
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.43	57.54
CDX70250	Canola	endoplasmic reticulum, extracellular	57.25	57.04
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	55.41	55.93
EER88839	Sorghum	endoplasmic reticulum, extracellular	54.31	55.22
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	47.52	54.99
KRH15981	Soybean	extracellular	15.23	54.97
Solyc01g111520.2.1	Tomato	nucleus	53.58	54.17
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	53.21	53.8
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	53.03	53.62
HORVU7Hr1G101310.22	Barley	extracellular, golgi	52.11	52.69
Solyc12g089330.1.1	Tomato	endoplasmic reticulum, extracellular	49.72	51.62
KRG95324	Soybean	extracellular, plasma membrane	11.38	51.24
TraesCS7B01G347000.3	Wheat	extracellular, golgi	53.76	50.78
Zm00001d014499_P004	Maize	endoplasmic reticulum, extracellular	44.59	48.89
Solyc08g021940.1.1	Tomato	extracellular, plasma membrane	16.15	30.88
Solyc07g007680.2.1	Tomato	plastid	30.46	29.54
Solyc12g009790.1.1	Tomato	endoplasmic reticulum	30.09	29.03
Solyc12g009760.1.1	Tomato	extracellular	6.42	28.23
Solyc10g017590.2.1	Tomato	mitochondrion	23.49	26.95
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	24.4	26.87
Solyc01g094030.2.1	Tomato	plastid	24.59	26.53
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	11.74	24.9
Solyc12g009700.1.1	Tomato	extracellular, plasma membrane	13.58	24.18

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810
GO:GO:0006869	GO:GO:0008150	GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008
InterPro:IPR031468	InterPro:IPR035892	UniProt:K4CQH5	PFAM:PF00168	PFAM:PF17047	PFscan:PS50004
PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF62	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562
EnsemblPlantsGene:Solyc09g007860.2	EnsemblPlants:Solyc09g007860.2.1	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI000276BAFF	SEG:seg

Description

No Description!

Coordinates

chr9:-:1382071..1388219

Molecular Weight (calculated)

61827.6 Da

IEP (calculated)

7.400

GRAVY (calculated)

-0.077

Length

545 amino acids

Sequence
(BLAST)

001: MGILGSLLGI LGFGVGISIG LIVGYFLFIY FEPTDVKDYP ESTAFDEIEP NTLVDLLPEL PLWVMNPDYE RVNWFNDFIA NMWPYLDKAI CGIIKSTSEP
101: IFAEYIGKYQ IKSIEFEKLT LGTIPPRLHG MKVYDSNEKE LVFEFAVRWA GNPNIVVALK LLSLNISAQL IDFQVASTAR ATLKPFVPTF PCFSNIVVSL
201: TKKPEVDFGL KVIGGDLMAI PGLHHFVQET ISKQVARLYL WPQTLDIPIL DSSIGAVKKP VGILHVKVLR AQKLLNMDFL SKSDPYVKLS LGGDMLPAKK
301: TTVKMNSLDP VWDEDFKLTV KDPEAQVLQL HLYDWEKIGA HDKLGMQVVP LKLLKPYEKK ELTLDLVNSL NPNDPQNKKP RGQLMLEMSF IPFQEDSVKF
401: SGPLSFHERK ESISSLSDDI SLRGAGLLLV TVIAAEDVEG KNHTNPYAVV VLRGEKKKTK ARNKTWNPKW DEEFQFMLEE APLKDLIHIE VKSKKRRFGF
501: RSKEVLGYVD IQLKDVIYNG RINEKYHLIN SKDGILHVDI RWKVI

Best Arabidopsis Sequence Match ( AT5G04220.2 )
(BLAST)

001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS

Arabidopsis Description

SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.