Factsheet for Zm00001d014499_P004

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88839	Sorghum	endoplasmic reticulum, extracellular	85.92	79.66
VIT_18s0001g14590.t01	Wine grape	cytosol	12.68	68.48
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	74.25	68.33
VIT_09s0018g01580.t01	Wine grape	cytosol	12.47	67.39
HORVU7Hr1G101310.22	Barley	extracellular, golgi	72.64	66.98
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	72.23	66.6
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	72.03	66.42
TraesCS7B01G347000.3	Wheat	extracellular, golgi	73.44	63.26
VIT_10s0003g03240.t01	Wine grape	mitochondrion	14.49	59.5
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	14.49	59.5
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	46.48	49.04
VIT_13s0019g04450.t01	Wine grape	endoplasmic reticulum, extracellular	52.52	47.98
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	51.31	46.62
KRH15981	Soybean	extracellular	14.08	46.36
KRG91923	Soybean	endoplasmic reticulum, extracellular, plasma membrane	50.5	46.05
KRH34856	Soybean	extracellular	50.3	45.87
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	48.49	44.63
Solyc09g007860.2.1	Tomato	endoplasmic reticulum	48.89	44.59
PGSC0003DMT400055528	Potato	mitochondrion	48.89	44.59
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	47.89	43.75
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	47.48	43.38
CDX70250	Canola	endoplasmic reticulum, extracellular	47.69	43.33
Zm00001d006238_P001	Maize	plasma membrane	46.28	42.67
Zm00001d030116_P001	Maize	cytosol	22.74	37.29
KRG95324	Soybean	extracellular, plasma membrane	8.65	35.54
Zm00001d022625_P006	Maize	cytosol, peroxisome, plastid	45.27	35.21
Zm00001d028437_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	25.96	24.86
Zm00001d002090_P001	Maize	endoplasmic reticulum, extracellular, plastid	25.96	22.4
Zm00001d007034_P008	Maize	endoplasmic reticulum, extracellular, plasma membrane	25.96	21.98
Zm00001d019472_P005	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	22.74	21.12

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	UniProt:A0A1D6GTR5	ProteinID:AQK66389.1	InterPro:C2_dom	InterPro:C2_domain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892
PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360	PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774
PANTHER:PTHR10774:SF62	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix
UniParc:UPI0008431E9C	EnsemblPlantsGene:Zm00001d014499	EnsemblPlants:Zm00001d014499_P004	EnsemblPlants:Zm00001d014499_T004	SEG:seg	:

Description

Synaptotagmin-3

Coordinates

chr5:+:50438959..50448486

Molecular Weight (calculated)

57041.8 Da

IEP (calculated)

8.370

GRAVY (calculated)

-0.234

Length

497 amino acids

Sequence
(BLAST)

001: MGLVGGVVGF CLGLPIGLAA AYFVYLRYFA AARRLQDPVI KPLRDLDSET LQATIPHIPL WVKSPDYERI DWMNKFIFDM WPFLDKAICK HINRATRPIF
101: DQYVGQYGIE SIEFGELTLG TLPPTFQGIK VYEMLEKELV IEPVIRWAST SNVTVNVKVQ SFEVTVQLED LHIMLTPRVI LKSLVPSFPC FANLCVSLME
201: KPRIDFGLKL LCGDVMAIPG LYQYVQDQLS KQISNLYHWP KVIQIPILDG ASGATKKPVG ILHVKVIRAL NLLKMDFLGK SDPYVKMRLS GERLPSKKTS
301: VKMSNLNPEW NEHFRFIVKD PDTQVLELHM FDWEKVKMHD KLGMQVIPLR LLTPYESKLF TLDLVRSMNP NDPQNKKNRG KLIVELTFDP LREDNMSSDA
401: EGNASVIRKT REPRWSEEFQ FMVDEPPVED KIHIQVKSKR RGLPFRNKAR IAGACEYKPG GCGEQRPDQR EVPPHQLQER DDTRGDQMEH CVIIQLV

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.