Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009476.1-P | Field mustard | endoplasmic reticulum, extracellular | 98.54 | 99.08 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.62 | 98.16 |
| AT5G04220.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 86.84 | 87.96 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 63.99 | 64.22 |
| KRH34856 | Soybean | extracellular | 63.8 | 64.04 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 63.07 | 63.42 |
| PGSC0003DMT400055528 | Potato | mitochondrion | 57.95 | 58.17 |
| Solyc09g007860.2.1 | Tomato | endoplasmic reticulum | 57.04 | 57.25 |
| GSMUA_Achr4P18210_001 | Banana | extracellular, plasma membrane | 14.81 | 57.04 |
| KRH15981 | Soybean | extracellular | 15.17 | 54.97 |
| EER88839 | Sorghum | endoplasmic reticulum, extracellular | 53.75 | 54.85 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 53.93 | 54.63 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 46.62 | 54.14 |
| TraesCS7A01G447300.1 | Wheat | extracellular, vacuole | 53.02 | 53.8 |
| TraesCS7D01G437000.1 | Wheat | extracellular, vacuole | 52.29 | 53.06 |
| HORVU7Hr1G101310.22 | Barley | extracellular, golgi | 51.92 | 52.69 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 51.19 | 51.76 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 50.64 | 51.2 |
| TraesCS7B01G347000.3 | Wheat | extracellular, golgi | 53.02 | 50.26 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 48.99 | 49.81 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 49.91 | 49.73 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 49.73 | 49.54 |
| KRG95324 | Soybean | extracellular, plasma membrane | 10.79 | 48.76 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 48.26 | 47.83 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 43.33 | 47.69 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 31.63 | 30.95 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 31.26 | 30.87 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 31.44 | 30.61 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 31.44 | 30.18 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 31.63 | 30.09 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 31.44 | 29.81 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 24.31 | 28.06 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 25.78 | 27.92 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 24.13 | 27.85 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 23.95 | 27.64 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:5.8.1.2 | GO:A0A078BZT8 | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDX70250 |
| ProteinID:CDX70250 | ProteinID:CDX70250.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00136388001 |
| InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF62 | SMART:SM00239 | InterPro:SMP_LBD |
| SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EEBA2E | SEG:seg | : |
Description
BnaA10g25990D
Coordinates
chrLK031790:+:3783084..3786026
Molecular Weight (calculated)
62416.3 Da
IEP (calculated)
9.022
GRAVY (calculated)
-0.163
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFGSVLGI LGFAIGIPIG LVVGFFVFVY SQPSHEEYPP ARPLVETSIT LLLDLLPDIP LWMKNPDYER VDWFNRFLSY MWPYLDKAIC EIIKSSAQPI
101: FADYIGTFCI ESIEFETLSL GSLPPTGNVP NLSAGVKFYE TNEKELLFEP SVKWAGNPNI VLVVKLMSLR IKVQLVDLQI FAIMRVALKP LLPTFPCFGA
201: VVVSLMEKPH VDFGLKVLGG DLMSIPGLYR YVQETIKRQV SSMYHWPQVL EIPILDASTA SVKKPVGLLH VNIIRARNLL KKDLLGTSDP YVKLSLTGEK
301: LPAKKTTIKK RNLNPEWNEH FKLIVKDPIS QVLQLEVFDW DKVGGHDRLG MQMIPLKKIN PGEKKVFNLD LIKNSNIVMD VPEKKQRGRL ELDLRYVPFR
401: DESLKYRNDV QDEKSSEDDD EFLSNAGLLS VAIQSAKDVE GKKKYTNPYA LVLFRGEKKR TKMLRKTRDP RWNEEFQFTL EEPPLKESIR VEVMSKGTGF
501: HFRSKEELGH VDINLDDVVA NGRINQKYHL INSRNGVIHV EIRWTTG
101: FADYIGTFCI ESIEFETLSL GSLPPTGNVP NLSAGVKFYE TNEKELLFEP SVKWAGNPNI VLVVKLMSLR IKVQLVDLQI FAIMRVALKP LLPTFPCFGA
201: VVVSLMEKPH VDFGLKVLGG DLMSIPGLYR YVQETIKRQV SSMYHWPQVL EIPILDASTA SVKKPVGLLH VNIIRARNLL KKDLLGTSDP YVKLSLTGEK
301: LPAKKTTIKK RNLNPEWNEH FKLIVKDPIS QVLQLEVFDW DKVGGHDRLG MQMIPLKKIN PGEKKVFNLD LIKNSNIVMD VPEKKQRGRL ELDLRYVPFR
401: DESLKYRNDV QDEKSSEDDD EFLSNAGLLS VAIQSAKDVE GKKKYTNPYA LVLFRGEKKR TKMLRKTRDP RWNEEFQFTL EEPPLKESIR VEVMSKGTGF
501: HFRSKEELGH VDINLDDVVA NGRINQKYHL INSRNGVIHV EIRWTTG
001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
Arabidopsis Description
SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.