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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012209.1-P Field mustard cytosol 69.02 98.7
CDY43415 Canola endoplasmic reticulum, extracellular 94.2 96.65
AT1G20080.3 Thale cress endoplasmic reticulum, extracellular, plasma membrane 90.4 92.92
CDY54339 Canola endoplasmic reticulum, extracellular 89.31 89.8
CDY62938 Canola endoplasmic reticulum, extracellular 88.41 88.89
VIT_18s0001g14630.t01 Wine grape endoplasmic reticulum, extracellular 74.28 76.07
KRH17448 Soybean mitochondrion 71.92 73.79
KRH05967 Soybean endoplasmic reticulum, extracellular 71.56 73.42
GSMUA_Achr4P25570_001 Banana endoplasmic reticulum, extracellular 70.29 72.12
GSMUA_AchrUn_... Banana endoplasmic reticulum 68.66 70.45
GSMUA_AchrUn_... Banana endoplasmic reticulum 66.85 69.36
PGSC0003DMT400075422 Potato endoplasmic reticulum, extracellular 66.85 68.46
Zm00001d006238_P001 Maize plasma membrane 66.3 67.9
OQU92056 Sorghum endoplasmic reticulum 65.94 67.53
EER99265 Sorghum endoplasmic reticulum 65.94 67.53
HORVU5Hr1G084010.1 Barley endoplasmic reticulum, extracellular 65.76 67.35
Solyc12g089330.1.1 Tomato endoplasmic reticulum, extracellular 63.95 67.24
CDY13846 Canola endoplasmic reticulum, extracellular 65.22 66.54
CDX81995 Canola endoplasmic reticulum, extracellular 65.22 66.54
TraesCS5A01G330400.1 Wheat golgi 64.86 66.42
TraesCS5D01G336200.1 Wheat endoplasmic reticulum 64.67 66.23
Zm00001d030116_P001 Maize cytosol 35.87 65.35
TraesCS5B01G330600.1 Wheat endoplasmic reticulum 64.67 64.56
GSMUA_Achr1P26490_001 Banana cytosol, mitochondrion 57.61 59.89
TraesCS5D01G336100.1 Wheat cytosol 33.15 59.22
HORVU5Hr1G084020.3 Barley cytosol 23.19 58.72
TraesCS5B01G330500.1 Wheat cytosol 31.16 58.5
Zm00001d022625_P006 Maize cytosol, peroxisome, plastid 64.86 56.02
CDY41389 Canola endoplasmic reticulum, extracellular, plasma membrane 47.64 48.35
CDX70250 Canola endoplasmic reticulum, extracellular 47.83 48.26
CDY47278 Canola endoplasmic reticulum, extracellular 29.89 29.52
CDX85729 Canola endoplasmic reticulum, extracellular, plastid 29.17 29.06
CDY10116 Canola endoplasmic reticulum, extracellular 29.89 28.7
CDY51108 Canola endoplasmic reticulum, extracellular, plastid 29.17 28.65
CDY15543 Canola endoplasmic reticulum, extracellular 29.53 28.6
CDX86575 Canola endoplasmic reticulum, extracellular 29.71 28.42
CDY45675 Canola endoplasmic reticulum, extracellular 24.09 26.34
CDY42483 Canola endoplasmic reticulum, extracellular 22.1 25.74
CDX67848 Canola endoplasmic reticulum, extracellular, plasma membrane 21.92 25.53
CDX89094 Canola endoplasmic reticulum, extracellular, plasma membrane 21.92 25.53
Protein Annotations
Gene3D:2.60.40.150MapMan:5.8.1.2GO:A0A078J4D8UniProt:A0A078J4D8InterPro:C2_domInterPro:C2_domain_sf
EnsemblPlants:CDY57593ProteinID:CDY57593ProteinID:CDY57593.1GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0006810GO:GO:0006869GO:GO:0008150GO:GO:0008289GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00022397001InterPro:IPR000008InterPro:IPR031468InterPro:IPR035892PFAM:PF00168PFAM:PF17047
PFscan:PS50004PFscan:PS51847PANTHER:PTHR10774PANTHER:PTHR10774:SF50SMART:SM00239InterPro:SMP_LBD
SUPFAM:SSF49562InterPro:Synaptotagmin_SMPTMHMM:TMhelixUniParc:UPI0004EE4F5FSEG:seg:
Description
BnaAnng14690DBnaAnng14690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4D8]
Coordinates
chrLK033587:-:15640..18749
Molecular Weight (calculated)
62526.3 Da
IEP (calculated)
5.566
GRAVY (calculated)
-0.162
Length
552 amino acids
Sequence
(BLAST)
001: MGIISTILGT FGFGFGTTVG IVIGYYLFIY HQSTDDPDIK PLVELDSETI STMFPEIPLW VKNPDFDRID WLNKLIGHMW PYMNKAICNM AKSIAKPIIA
101: EQIPNYKIDS VEFEMLTLGL PPTFQILLPC CLFLFSPLFA GMKVYATDDK EIIMELSVKW AGNPNILVAV KAFGFKATVQ VIDLQVFATP RITLKPLVPS
201: FPCFANIFVS LMDKPQVDFG LKLLGADVMA IPGLYRFVQE LIKDQVANMY LWPKTLTVQI MDPSKAMKKH VGLLNVKVIK AIKLKKKDLL DGSDPYVKLT
301: LSGDKVPGKK TVVKHSNLNP EWNEEFDLVV KEPESQELQL IVYDWEQVGK HDKIGMNVIQ LKDLTPEEPK LMTLELLKSM EPNEPVSEKS HGQLVVEVEY
401: KSFKEDDIPD NLDDPNAVEK APEGTPSGGG LLVVIVHEAE DLEGKYHTNP SVRLMFKGEE RKTKRVKKNR EPRWDEDFQF PLDEPPINDK LHVEVISTTS
501: RIGLNMHPKE TLGYVVINLG DVVSNRRIND KYNLIDSKNG RIQIELQWRT SS
Best Arabidopsis Sequence Match ( AT1G20080.2 )
(BLAST)
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.