Factsheet for GSMUA_AchrUn_randomP10450_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P25570_001	Banana	endoplasmic reticulum, extracellular	88.66	88.66
Os02t0448400-01	Rice	plasma membrane	80.86	80.86
VIT_18s0001g14630.t01	Wine grape	endoplasmic reticulum, extracellular	77.32	77.18
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	76.02	76.88
VIT_03s0038g02330.t01	Wine grape	endoplasmic reticulum	75.09	74.95
PGSC0003DMT400015793	Potato	endoplasmic reticulum	74.91	74.77
Solyc01g111520.2.1	Tomato	nucleus	74.91	74.77
KRH17448	Soybean	mitochondrion	74.54	74.54
KRH29282	Soybean	endoplasmic reticulum	74.16	74.03
KRH05967	Soybean	endoplasmic reticulum, extracellular	73.98	73.98
KRH24304	Soybean	endoplasmic reticulum	73.79	73.65
KRH51399	Soybean	endoplasmic reticulum, extracellular, plasma membrane	73.05	73.32
PGSC0003DMT400075422	Potato	endoplasmic reticulum, extracellular	71.56	71.43
AT1G20080.3	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	71.19	71.32
Solyc12g089330.1.1	Tomato	endoplasmic reticulum, extracellular	68.59	70.29
CDY43415	Canola	endoplasmic reticulum, extracellular	70.07	70.07
CDY62938	Canola	endoplasmic reticulum, extracellular	71.38	69.95
CDY54339	Canola	endoplasmic reticulum, extracellular	71.38	69.95
Bra016478.1-P	Field mustard	endoplasmic reticulum, extracellular	65.61	69.35
CDY13846	Canola	endoplasmic reticulum, extracellular	69.14	68.76
Bra031157.1-P	Field mustard	endoplasmic reticulum, extracellular	69.14	68.76
CDY57593	Canola	endoplasmic reticulum, extracellular	70.45	68.66
CDX81995	Canola	endoplasmic reticulum, extracellular	68.96	68.58
Bra012209.1-P	Field mustard	cytosol	48.7	67.88
GSMUA_Achr1P26490_001	Banana	cytosol, mitochondrion	65.61	66.48
AT2G20990.3	Thale cress	endoplasmic reticulum, extracellular	68.77	63.9
AT2G21010.1	Thale cress	cytosol	27.51	57.81
GSMUA_Achr4P18210_001	Banana	extracellular, plasma membrane	14.5	54.93
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	47.21	53.93
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	25.84	27.86
AT2G21040.1	Thale cress	cytosol	13.38	27.59
GSMUA_Achr7P05380_001	Banana	endoplasmic reticulum	29.37	27.1
GSMUA_Achr1P26040_001	Banana	endoplasmic reticulum, golgi	27.88	26.83
GSMUA_Achr3P19840_001	Banana	endoplasmic reticulum, golgi, plastid	28.81	25.96
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	25.84	25.88

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008289	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_AchrUn_randomG10450_001	EnsemblPlants:GSMUA_AchrUn_randomP10450_001	EnsemblPlants:GSMUA_AchrUn_randomT10450_001	InterPro:IPR000008	InterPro:IPR031468
InterPro:IPR035892	UniProt:M0U804	PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360	PFscan:PS50004
PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF152	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562
InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI0002958ACA	SEG:seg	:	:

Description

Putative Extended synaptotagmin-2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10450_001]

Coordinates

chrchrUn_random:+:50481243..50485020

Molecular Weight (calculated)

61272.4 Da

IEP (calculated)

6.865

GRAVY (calculated)

-0.350

Length

538 amino acids

Sequence
(BLAST)

001: MGFFSSVLGF FGFGIGIAVG LVIGYYLFIY FQPTDVKDPE IRPLFEQDAK SLEHMFPEIP VWVKNPDFDR IDWLNKFLEH MWPYLDKAIC KTAKEIAKPI
101: IAENTAKFKM ESVEFETLTL GTLPPTFQGM KVYTTDEKEL IMEPSLKWAG NPNVTVVVKA FGLKASAQVI DLQVFAIPRI TLKPLVPSFP CFAKILVSLM
201: EKPHVDFGLK LLGADLMSIP GLYRFVQETI KKQVANMYLW PKTLQVAIMD PTRAQKKPTG ILNVNVVRAY KLKKKDLLGK SDPYVKLKLS DDNLPSKKTT
301: VKRSNLNPEW NEEFKLVVKE PESQALELSV YDWEQVGKHD KMGVNSIPLK DLTPDETKSL TLDLLKNLDP NDPQNDKSRG QIVLEVTYRP FKEGEVANDI
401: SEDEGEIEKP PEGTPAGGGL LVVIVHEAQD LEGKHHTNPY VRILFRGEEK KTKCLKKNRD PRWEEEFQYM CEEPPTNDKM HVEVLSKPPS IGIHSKEMLG
501: YVVINVADAV TNKRINEKYH LIDSRNGRIQ VELQWRSS

Best Arabidopsis Sequence Match ( AT1G20080.2 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.