Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G084020.3 | Barley | cytosol | 44.14 | 51.83 |
| Zm00001d030116_P001 | Maize | cytosol | 57.81 | 48.84 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 54.69 | 47.62 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 55.86 | 46.28 |
| Bra031157.1-P | Field mustard | endoplasmic reticulum, extracellular | 83.98 | 39.74 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 83.98 | 39.74 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 83.98 | 39.74 |
| AT2G20990.3 | Thale cress | endoplasmic reticulum, extracellular | 87.89 | 38.86 |
| AT2G21040.1 | Thale cress | cytosol | 35.94 | 35.25 |
| VIT_03s0038g02330.t01 | Wine grape | endoplasmic reticulum | 66.41 | 31.54 |
| Solyc01g111520.2.1 | Tomato | nucleus | 65.23 | 30.98 |
| PGSC0003DMT400015793 | Potato | endoplasmic reticulum | 65.23 | 30.98 |
| KRH29282 | Soybean | endoplasmic reticulum | 63.67 | 30.24 |
| KRH24304 | Soybean | endoplasmic reticulum | 62.5 | 29.68 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 60.94 | 29.1 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 60.16 | 28.95 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 60.55 | 28.81 |
| AT1G20080.3 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 59.77 | 28.49 |
| EER99265 | Sorghum | endoplasmic reticulum | 59.77 | 28.39 |
| OQU92056 | Sorghum | endoplasmic reticulum | 59.38 | 28.2 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 58.98 | 28.01 |
| TraesCS5A01G330400.1 | Wheat | golgi | 58.98 | 28.01 |
| Zm00001d006238_P001 | Maize | plasma membrane | 58.98 | 28.01 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 58.2 | 27.64 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 57.81 | 27.51 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 58.2 | 26.94 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 55.47 | 26.74 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 59.77 | 23.94 |
| AT5G04220.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 49.22 | 23.33 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 30.47 | 13.93 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 17.19 | 8.63 |
| AT3G61030.1 | Thale cress | mitochondrion | 12.5 | 6.29 |
| AT3G60950.1 | Thale cress | mitochondrion | 13.28 | 5.42 |
| Os01t0819300-01 | Rice | cytosol, mitochondrion, plastid | 0.39 | 0.87 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:816635 | ProteinID:AEC07112.1 | ArrayExpress:AT2G21010 | EnsemblPlantsGene:AT2G21010 |
| RefSeq:AT2G21010 | TAIR:AT2G21010 | RefSeq:AT2G21010-TAIR-G | EnsemblPlants:AT2G21010.1 | TAIR:AT2G21010.1 | InterPro:C2_dom |
| InterPro:C2_domain_sf | UniProt:F4IFM9 | InterPro:IPR000008 | InterPro:IPR035892 | RefSeq:NP_179697.2 | PFAM:PF00168 |
| PFscan:PS50004 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI000034ED56 |
| SEG:seg | : | : | : | : | : |
Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IFM9]
Coordinates
chr2:+:9020944..9021870
Molecular Weight (calculated)
29545.5 Da
IEP (calculated)
6.875
GRAVY (calculated)
-0.706
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMINPYVQI ELSEDKISSK KTTVKHKNLN PEWNEEFKFS VRDPKTQVLE FNVYGWEKIG KHDKMGMNVL ALKELAPDER KAFTLELRKT LDGGEEGQPG
101: KYRGKLEVEL LYKPFTEEEM QAVQKAPEGT PVAGGMLVVI VHSAEDVEGK HHTNPYVHIY FKGEERKTKN VKKNKDPKWN EEFSFMLEEP PVHEKLHVEV
201: FSTSSRIGLL HPKETLGYVD IPVVDVVNNK RMNQKFHLID SKNGKIQIEL DWQTAF
101: KYRGKLEVEL LYKPFTEEEM QAVQKAPEGT PVAGGMLVVI VHSAEDVEGK HHTNPYVHIY FKGEERKTKN VKKNKDPKWN EEFSFMLEEP PVHEKLHVEV
201: FSTSSRIGLL HPKETLGYVD IPVVDVVNNK RMNQKFHLID SKNGKIQIEL DWQTAF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.