Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29282 | Soybean | endoplasmic reticulum | 97.22 | 97.22 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 83.49 | 83.96 |
| KRH17448 | Soybean | mitochondrion | 78.48 | 78.62 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 78.11 | 78.25 |
| VIT_03s0038g02330.t01 | Wine grape | endoplasmic reticulum | 78.11 | 78.11 |
| PGSC0003DMT400015793 | Potato | endoplasmic reticulum | 78.11 | 78.11 |
| Solyc01g111520.2.1 | Tomato | nucleus | 77.74 | 77.74 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 74.4 | 74.54 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 73.65 | 73.79 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 73.28 | 73.01 |
| Bra031157.1-P | Field mustard | endoplasmic reticulum, extracellular | 72.91 | 72.64 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 72.91 | 72.64 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 71.61 | 72.56 |
| EER99265 | Sorghum | endoplasmic reticulum | 72.17 | 72.17 |
| TraesCS5A01G330400.1 | Wheat | golgi | 71.61 | 71.61 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 71.61 | 71.61 |
| Zm00001d006238_P001 | Maize | plasma membrane | 71.43 | 71.43 |
| OQU92056 | Sorghum | endoplasmic reticulum | 71.24 | 71.24 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 71.24 | 71.24 |
| Zm00001d030116_P001 | Maize | cytosol | 38.96 | 69.31 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 71.06 | 69.26 |
| AT2G20990.3 | Thale cress | endoplasmic reticulum, extracellular | 73.1 | 68.05 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 36.73 | 64.08 |
| HORVU5Hr1G084020.3 | Barley | cytosol | 25.79 | 63.76 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 34.51 | 63.27 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 61.6 | 62.52 |
| AT2G21010.1 | Thale cress | cytosol | 29.68 | 62.5 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 69.94 | 59.0 |
| KRH34856 | Soybean | extracellular | 56.4 | 55.78 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 55.29 | 54.68 |
| KRH15981 | Soybean | extracellular | 12.99 | 46.36 |
| Os01t0819300-01 | Rice | cytosol, mitochondrion, plastid | 9.09 | 42.61 |
| KRG95324 | Soybean | extracellular, plasma membrane | 9.09 | 40.5 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 30.61 | 28.75 |
| KRH03623 | Soybean | endoplasmic reticulum | 30.98 | 28.11 |
| AT2G21040.1 | Thale cress | cytosol | 12.8 | 26.44 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 24.68 | 25.38 |
| KRH40562 | Soybean | endoplasmic reticulum | 24.68 | 24.86 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 24.49 | 24.67 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 24.86 | 24.59 |
| KRH55269 | Soybean | cytosol, plasma membrane | 10.95 | 22.52 |
Protein Annotations
| EntrezGene:100781189 | Gene3D:2.60.40.150 | MapMan:5.8.1.2 | EMBL:ACUP02007174 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlantsGene:GLYMA_12G032400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | UniProt:K7LST9 | EnsemblPlants:KRH24304 | ProteinID:KRH24304 | ProteinID:KRH24304.1 | PFAM:PF00168 |
| PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 |
| SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI000233CA47 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:2429011..2439833
Molecular Weight (calculated)
61647.9 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.329
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFGTILGF LGFGVGISIG LVSGYFLFIY FQPTNVEDPE IKPLSEQEQE TLQRMFPEIP LWIKNPDFDR LDWLNKFVEY MWPYLDKAIC KTAKNIAKPI
101: IAEQIPKYKI DSVEFETLTL GSLPPTFQGM KVFVTDEKEL IMEPSVKWAG NPNVTVSVKA FGLKATVQVV DLQVFLLPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LIGADLMSIP GVYRIVQELI KDQVANMYLW PKTLEVQVLD MSKALKRPVG ILHVKVLQAM KLKKKDLLGA SDPYVKLKLT EDKLPSKKTT
301: VKHNNLNPEW NEEFNIVVKD PDSQVLEINV YDWEQVGKRD KMGMNVIPLK EVSPEEPKRF TLDLLKNMDP NDAQNEKSRG QIVVELTYKP FKEEDLGKGF
401: EETQTVPKAP EGTPAGGGLL VVIVHEAQDV EGKYHTNPHV RLIFRGDEKK TKRIKKNRDP RWEDEFQFMV DEPPTNDRLH VEVVSTSSRN LLHQKESLGY
501: IDINLGDVVA NKRINEKYHL IDSKNGRLQI ELQWRTSEA
101: IAEQIPKYKI DSVEFETLTL GSLPPTFQGM KVFVTDEKEL IMEPSVKWAG NPNVTVSVKA FGLKATVQVV DLQVFLLPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LIGADLMSIP GVYRIVQELI KDQVANMYLW PKTLEVQVLD MSKALKRPVG ILHVKVLQAM KLKKKDLLGA SDPYVKLKLT EDKLPSKKTT
301: VKHNNLNPEW NEEFNIVVKD PDSQVLEINV YDWEQVGKRD KMGMNVIPLK EVSPEEPKRF TLDLLKNMDP NDAQNEKSRG QIVVELTYKP FKEEDLGKGF
401: EETQTVPKAP EGTPAGGGLL VVIVHEAQDV EGKYHTNPHV RLIFRGDEKK TKRIKKNRDP RWEDEFQFMV DEPPTNDRLH VEVVSTSSRN LLHQKESLGY
501: IDINLGDVVA NKRINEKYHL IDSKNGRLQI ELQWRTSEA
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.