Factsheet for TraesCS5D01G336100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G330500.1	Wheat	cytosol	82.85	87.07
Zm00001d030116_P001	Maize	cytosol	77.67	79.21
HORVU5Hr1G084020.3	Barley	cytosol	55.66	78.9
AT2G21010.1	Thale cress	cytosol	46.28	55.86
TraesCS5D01G336200.1	Wheat	endoplasmic reticulum	82.52	47.31
Bra012209.1-P	Field mustard	cytosol	57.61	46.11
OQU92056	Sorghum	endoplasmic reticulum	79.61	45.64
EER99265	Sorghum	endoplasmic reticulum	79.29	45.45
Os09t0538800-01	Rice	plasma membrane	78.96	45.27
Zm00001d006238_P001	Maize	plasma membrane	78.64	45.08
Zm00001d022625_P006	Maize	cytosol, peroxisome, plastid	78.96	38.18
KRH29282	Soybean	endoplasmic reticulum	65.05	37.29
VIT_18s0001g14630.t01	Wine grape	endoplasmic reticulum, extracellular	64.72	37.11
KRH51399	Soybean	endoplasmic reticulum, extracellular, plasma membrane	63.75	36.75
KRH24304	Soybean	endoplasmic reticulum	64.08	36.73
VIT_03s0038g02330.t01	Wine grape	endoplasmic reticulum	62.78	35.99
KRH05967	Soybean	endoplasmic reticulum, extracellular	61.49	35.32
PGSC0003DMT400015793	Potato	endoplasmic reticulum	61.49	35.25
KRH17448	Soybean	mitochondrion	61.16	35.13
Solyc12g089330.1.1	Tomato	endoplasmic reticulum, extracellular	59.55	35.05
Solyc01g111520.2.1	Tomato	nucleus	60.84	34.88
CDY43415	Canola	endoplasmic reticulum, extracellular	60.52	34.76
PGSC0003DMT400075422	Potato	endoplasmic reticulum, extracellular	59.55	34.14
AT1G20080.3	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	58.58	33.71
CDY62938	Canola	endoplasmic reticulum, extracellular	59.55	33.52
CDY54339	Canola	endoplasmic reticulum, extracellular	59.22	33.33
CDY57593	Canola	endoplasmic reticulum, extracellular	59.22	33.15
CDY13846	Canola	endoplasmic reticulum, extracellular	57.28	32.72
Bra031157.1-P	Field mustard	endoplasmic reticulum, extracellular	57.28	32.72
CDX81995	Canola	endoplasmic reticulum, extracellular	56.96	32.53
Bra016478.1-P	Field mustard	endoplasmic reticulum, extracellular	52.1	31.63
AT2G20990.3	Thale cress	endoplasmic reticulum, extracellular	56.63	30.22
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	46.6	26.72
AT2G21040.1	Thale cress	cytosol	22.33	26.44
Os01t0819200-00	Rice	endoplasmic reticulum, extracellular	22.33	22.62
TraesCS6D01G083600.2	Wheat	endoplasmic reticulum, extracellular	29.45	16.19
TraesCS2D01G518800.1	Wheat	endoplasmic reticulum, extracellular, plastid	27.51	14.91
TraesCS2D01G242600.1	Wheat	plasma membrane	22.65	13.78
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	20.71	12.43

Protein Annotations

EnsemblPlants:TraesCS5D01G336100.1	EnsemblPlantsGene:TraesCS5D01G336100	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR10774	PANTHER:PTHR10774:SF50	PFAM:PF00168	PFscan:PS50004	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	TIGR:cd00030	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:-:425652196..425654422

Molecular Weight (calculated)

35310.4 Da

IEP (calculated)

7.752

GRAVY (calculated)

-0.675

Length

309 amino acids

Sequence
(BLAST)

001: MCLLWPKTQQ VPIMDPSTAS KRPVGILLVK VLGAQNLEKK GLFLLGSKSD PYVKLKMSDD WLPSKRTTVK RSNLNPEWHE DFKFVVKDLE NQSLVVNVFH
101: RAQVGKHAKM GMNRVLLKEL PPEETQVSTL NLLKTMDPND VQNEKSRGQI TLEVTYKPFK QEEDTEEESM DGTDEVQKAP DNTPAGGGLL FVILHEAQDV
201: EGKHHTNPYA KITFKGEEKK TKVVKKNRDP RWEHEFEFAC EEPPTNDKLH VQVLSKAGKI GGILHDKETL GYIDITLADV ISNRRINEKY RLIDSKYGQI
301: QIELQWRTS

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.