Factsheet for Os01t0819200-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 4
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0819300-01	Rice	cytosol, mitochondrion, plastid	20.66	54.78
EER99265	Sorghum	endoplasmic reticulum	78.69	44.53
Zm00001d006238_P001	Maize	plasma membrane	78.36	44.34
Os09t0538800-01	Rice	plasma membrane	77.7	43.97
OQU92056	Sorghum	endoplasmic reticulum	77.38	43.78
HORVU5Hr1G084010.1	Barley	endoplasmic reticulum, extracellular	75.74	42.86
TraesCS5A01G330400.1	Wheat	golgi	75.41	42.67
TraesCS5D01G336200.1	Wheat	endoplasmic reticulum	74.43	42.12
TraesCS5B01G330600.1	Wheat	endoplasmic reticulum	75.08	41.41
Os02t0448400-01	Rice	plasma membrane	66.89	37.92
Zm00001d022625_P006	Maize	cytosol, peroxisome, plastid	76.39	36.46
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	49.18	27.78
Zm00001d030116_P001	Maize	cytosol	24.92	25.08
TraesCS5D01G336100.1	Wheat	cytosol	22.62	22.33
TraesCS5B01G330500.1	Wheat	cytosol	20.98	21.77
Os07t0409100-01	Rice	plasma membrane	29.84	17.67
Os03t0251600-00	Rice	plasma membrane	28.2	16.29
HORVU5Hr1G084020.3	Barley	cytosol	1.31	1.83
Os04t0644800-01	Rice	cytosol	0.33	0.93

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	UniProt:A0A0P0V9S4	ProteinID:BAS74955.1	InterPro:C2_dom	InterPro:C2_domain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892
EnsemblPlantsGene:Os01g0819200	EnsemblPlants:Os01t0819200-00	PFAM:PF00168	PRINTS:PR00360	PFscan:PS50004	PFscan:PS51847
PANTHER:PTHR10774	PANTHER:PTHR10774:SF50	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI0003938BCE	:	:	:	:	:

Description

Similar to calcium lipid binding protein-like. (Os01t0819200-00)

Coordinates

chr1:-:34903696..34906955

Molecular Weight (calculated)

34891.8 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.085

Length

305 amino acids

Sequence
(BLAST)

001: MGIVSMVLSF IGFCIGFSVG IVIGYFLFIY FQPTDVKNVK VRPLVEYDSD SLDDTLPEIP LWLKNPDYDR LDWLNRFLEL MWPYLNKAIC RIAQDVANPI
101: IAKNKEKYKI DYIKFETFTL GSLPPTFQGV KVQVTNEQEL VMEPSLKWAG NPNTTVVVKA YGLKATIQPH VDFGLKLLGA DVMAIPVLYK FVQETIMDQV
201: ASMFLWPKTL EVPIMDPSKA SKKPVGILLV KVLRAQNLRE KGPLGKRDPY VKLKMSGSKL PSKKTAVKHS NLNPEWNQEF KFVIRDPETQ ELDINVFDWE
301: QAWNT

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.