Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 78.6 | 81.21 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 78.98 | 80.35 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 75.76 | 77.67 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 75.19 | 77.54 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 75.57 | 77.48 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 74.43 | 77.21 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 62.12 | 65.73 |
| PGSC0003DMT400035570 | Potato | cytosol | 45.08 | 63.64 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 62.31 | 62.79 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 60.8 | 62.57 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 58.52 | 62.42 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 56.06 | 62.32 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 59.47 | 62.18 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 59.47 | 62.18 |
| Os07t0409100-01 | Rice | plasma membrane | 60.42 | 61.94 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 59.09 | 61.78 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 59.66 | 61.76 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 55.3 | 61.6 |
| KRH40562 | Soybean | endoplasmic reticulum | 62.31 | 61.5 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.11 | 61.39 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.11 | 61.39 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 63.07 | 61.1 |
| Solyc01g094030.2.1 | Tomato | plastid | 58.33 | 60.99 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 55.49 | 60.79 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 61.55 | 60.75 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 60.42 | 59.4 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.41 | 58.37 |
| KRH55269 | Soybean | cytosol, plasma membrane | 28.22 | 56.87 |
| AT3G61030.1 | Thale cress | mitochondrion | 35.8 | 37.13 |
| AT3G60950.1 | Thale cress | mitochondrion | 35.98 | 30.3 |
| Os01t0819200-00 | Rice | endoplasmic reticulum, extracellular | 16.29 | 28.2 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 24.62 | 24.07 |
| Os09t0538800-01 | Rice | plasma membrane | 24.43 | 23.93 |
| Os02t0448400-01 | Rice | plasma membrane | 23.67 | 23.23 |
| Os01t0819300-01 | Rice | cytosol, mitochondrion, plastid | 3.22 | 14.78 |
| Os04t0644800-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A0P0VVI8 | ProteinID:BAS83291.1 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:CLB_plant | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | EnsemblPlantsGene:Os03g0251600 | EnsemblPlants:Os03t0251600-00 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 | SMART:SM00239 | InterPro:SMP_LBD |
| SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | UniParc:UPI000393C16D | SEG:seg | : | : |
Description
Similar to integral membrane single C2 domain protein. (Os03t0251600-00)
Coordinates
chr3:-:7989864..7992993
Molecular Weight (calculated)
56552.9 Da
IEP (calculated)
5.300
GRAVY (calculated)
-0.055
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: SSASPSSPAG RARWLAAPPN AAADVNALAS LDREDVKKIC GENLPEWVSF PEYEQVKWLN KQLSKLWPFV EEAATMVIRD SVEPILDDYR PAGISSLKFS
101: KLSLGTVPPK IEGIRIQSFK KGQITMDVDF RWGGDPNIVL AVDTLVASLP IQFKNLQVYT IIRVVFQLCD EIPCISAVVV ALLAEPKPRI DYILKAVGGS
201: LTAMPGLSDM IDDTVASLIA DMLQWPHRIV VPLGGVDVDV SDLELKPHGK LTVTVVRAES LKNKELIGKS DPYVVLYIRP MFKEKTSVID DNLNPEWNET
301: FSLIAEDKET QHLILQVFDE DKLKQDKRLG IAKLPLNDLE MESVQEINLQ LLSSLDTTKV KDKKDRGVLT IKVSSCPHGG ASWVLGTRDA KVFDADRRDN
401: TQVLYHPFTK AEALEALELE KKTVEERRKT KEETAAVSGA ADAASGVTST VTPAAGAGVA AGAAAPGAGA TAAGSGVGLV GTGIGAVGSG IGAFGTGLSK
501: AGKFVGRTVT GPFSSARRSA SSVPTIDE
101: KLSLGTVPPK IEGIRIQSFK KGQITMDVDF RWGGDPNIVL AVDTLVASLP IQFKNLQVYT IIRVVFQLCD EIPCISAVVV ALLAEPKPRI DYILKAVGGS
201: LTAMPGLSDM IDDTVASLIA DMLQWPHRIV VPLGGVDVDV SDLELKPHGK LTVTVVRAES LKNKELIGKS DPYVVLYIRP MFKEKTSVID DNLNPEWNET
301: FSLIAEDKET QHLILQVFDE DKLKQDKRLG IAKLPLNDLE MESVQEINLQ LLSSLDTTKV KDKKDRGVLT IKVSSCPHGG ASWVLGTRDA KVFDADRRDN
401: TQVLYHPFTK AEALEALELE KKTVEERRKT KEETAAVSGA ADAASGVTST VTPAAGAGVA AGAAAPGAGA TAAGSGVGLV GTGIGAVGSG IGAFGTGLSK
501: AGKFVGRTVT GPFSSARRSA SSVPTIDE
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.