Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 92.56 | 91.14 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 81.6 | 81.45 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 80.23 | 80.55 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 80.82 | 80.19 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 80.63 | 80.0 |
| Os03t0251600-00 | Rice | plasma membrane | 81.21 | 78.6 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 66.73 | 68.34 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 67.71 | 66.03 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 64.97 | 65.35 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 65.56 | 65.3 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.19 | 64.95 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.99 | 64.75 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 63.8 | 64.55 |
| KRH40562 | Soybean | endoplasmic reticulum | 67.51 | 64.49 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.69 | 64.35 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 59.69 | 64.35 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.49 | 64.14 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 63.99 | 64.12 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 67.12 | 64.11 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 67.91 | 63.67 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 61.06 | 63.03 |
| Solyc01g094030.2.1 | Tomato | plastid | 62.04 | 62.77 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 57.93 | 62.32 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 58.71 | 62.24 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 64.97 | 61.83 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 60.86 | 61.71 |
| PGSC0003DMT400035570 | Potato | cytosol | 44.62 | 60.96 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.38 | 56.42 |
| KRH55269 | Soybean | cytosol, plasma membrane | 28.18 | 54.96 |
| AT3G61030.1 | Thale cress | mitochondrion | 37.96 | 38.11 |
| KXG36798 | Sorghum | cytosol | 31.31 | 31.94 |
| AT3G60950.1 | Thale cress | mitochondrion | 38.55 | 31.42 |
| EES11541 | Sorghum | extracellular, golgi | 33.86 | 30.03 |
| EER88839 | Sorghum | endoplasmic reticulum, extracellular | 25.64 | 24.44 |
| EER99265 | Sorghum | endoplasmic reticulum | 25.44 | 24.12 |
| OQU92056 | Sorghum | endoplasmic reticulum | 25.05 | 23.75 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:8078842 | InterPro:C2_dom | InterPro:C2_domain_sf | UniProt:C5WQW8 |
| ncoils:Coil | EnsemblPlants:EER92549 | ProteinID:EER92549 | ProteinID:EER92549.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 |
| InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 |
| PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | EnsemblPlantsGene:SORBI_3001G435300 |
| SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0001A826C1 | RefSeq:XP_002465551.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:71375439..71379065
Molecular Weight (calculated)
55242.8 Da
IEP (calculated)
6.899
GRAVY (calculated)
-0.044
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFISGVIMG MIVGVALIAG WARAMARRAA KRSNKAADVS ALGSLNREDV KKICGENVPQ WISFPEYEQV KWLNKQLSKL WPFVEEAATM VIRDSVEPIL
101: DDYRPPGISS LKFSRLSLGT VPPKIEGIRI QSFKKGQITM DMDFRWGGDP NIILAVETLV ASLPIQFKNL QVYTIIRVVF QLSDEIPCIS AVVVALMAEP
201: KPRIDYILKA VGGSLTAVPG LSDMIDDTVA SVITDMLQWP HRIVVPLGGV DVDVSDLELK PHGKLTVTVV RAESLKNKEL IGKSDPYVVL FIRPMFKEKT
301: SVIDDNLNPH WNETFHLIAE DKETQSLVLE VFDEDNMKQD KRLGIAKLPL SDLEMETVQE VNLQLLSSLD TTKVKDKKDR GMLSIKVVYH QFTNAEAREA
401: LELEKQTVEE RRKVKSETAA VSGAADGASS GTASTVTHVA GTGVAAAGTG DSRAGSSGGM GIGAVGSGIG AFGSGLHKAG KSAGKFVGRT VTGPFSSARR
501: SASNVPNVVD E
101: DDYRPPGISS LKFSRLSLGT VPPKIEGIRI QSFKKGQITM DMDFRWGGDP NIILAVETLV ASLPIQFKNL QVYTIIRVVF QLSDEIPCIS AVVVALMAEP
201: KPRIDYILKA VGGSLTAVPG LSDMIDDTVA SVITDMLQWP HRIVVPLGGV DVDVSDLELK PHGKLTVTVV RAESLKNKEL IGKSDPYVVL FIRPMFKEKT
301: SVIDDNLNPH WNETFHLIAE DKETQSLVLE VFDEDNMKQD KRLGIAKLPL SDLEMETVQE VNLQLLSSLD TTKVKDKKDR GMLSIKVVYH QFTNAEAREA
401: LELEKQTVEE RRKVKSETAA VSGAADGASS GTASTVTHVA GTGVAAAGTG DSRAGSSGGM GIGAVGSGIG AFGSGLHKAG KSAGKFVGRT VTGPFSSARR
501: SASNVPNVVD E
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.