Factsheet for AT3G60950.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G61030.1	Thale cress	mitochondrion	77.35	95.28
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.22	57.17
CDX89094	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.06	56.96
CDY42483	Canola	endoplasmic reticulum, extracellular	42.9	56.75
AT3G61050.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	44.5	54.71
Bra014457.1-P	Field mustard	endoplasmic reticulum, extracellular	43.06	53.47
Bra003434.1-P	Field mustard	endoplasmic reticulum, extracellular	42.9	53.27
CDY45675	Canola	endoplasmic reticulum, extracellular	42.58	52.87
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	19.3	47.08
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	37.96	46.39
KRH48321	Soybean	endoplasmic reticulum, mitochondrion	38.6	46.18
Solyc01g094030.2.1	Tomato	plastid	36.84	45.74
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	35.89	45.45
Solyc10g017590.2.1	Tomato	mitochondrion	34.29	45.26
KRH65210	Soybean	endoplasmic reticulum, mitochondrion	38.44	45.05
PGSC0003DMT400026606	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	34.45	44.81
PGSC0003DMT400035570	Potato	cytosol	26.32	44.12
KRH40562	Soybean	endoplasmic reticulum	36.68	42.99
KRH00619	Soybean	mitochondrion, plasma membrane	37.16	42.75
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	33.65	42.28
TraesCS2B01G262400.1	Wheat	plasma membrane	34.13	42.13
TraesCS2D01G242600.1	Wheat	plasma membrane	34.13	42.13
TraesCS2A01G244800.1	Wheat	plasma membrane	34.13	42.13
EER96263	Sorghum	mitochondrion, plasma membrane	33.81	41.73
Os07t0409100-01	Rice	plasma membrane	33.01	40.19
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	34.29	40.04
EER93061	Sorghum	endoplasmic reticulum, mitochondrion	31.9	39.68
Zm00001d019472_P005	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	33.33	39.07
EER92549	Sorghum	endoplasmic reticulum, extracellular	31.42	38.55
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.1	37.86
Zm00001d028437_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	31.26	37.76
TraesCS4A01G081200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.78	37.48
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.3	37.33
HORVU4Hr1G062820.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	29.82	36.52
Os03t0251600-00	Rice	plasma membrane	30.3	35.98
HORVU2Hr1G052430.2	Barley	cytosol	19.3	34.28
KRH55269	Soybean	cytosol, plasma membrane	14.19	33.97
AT1G05500.1	Thale cress	endoplasmic reticulum, extracellular	20.89	23.39
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	17.38	20.19
AT1G20080.3	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	14.83	17.32
AT2G20990.3	Thale cress	endoplasmic reticulum, extracellular	14.19	15.37
AT2G21010.1	Thale cress	cytosol	5.42	13.28
AT2G21040.1	Thale cress	cytosol	1.59	3.83

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.60.10.10	MapMan:50.4.2	EntrezGene:825266	ProteinID:AEE80129.1	ArrayExpress:AT3G60950
EnsemblPlantsGene:AT3G60950	RefSeq:AT3G60950	TAIR:AT3G60950	RefSeq:AT3G60950-TAIR-G	EnsemblPlants:AT3G60950.1	TAIR:AT3G60950.1
Unigene:At.74905	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:CLB_plant	InterPro:Endo/exonu/phosph_ase_sf	UniProt:F4JD16
GO:GO:0003674	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0004527	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886
GO:GO:0006139	GO:GO:0006355	GO:GO:0006810	GO:GO:0006869	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0090305	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	InterPro:IPR036691
RefSeq:NP_567106.5	PFAM:PF00168	PO:PO:0000005	PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774
PANTHER:PTHR10774:SF51	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	SUPFAM:SSF56219	UniParc:UPI0001E92DBF
SEG:seg	:	:	:	:	:

Description

C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase [Source:UniProtKB/TrEMBL;Acc:F4JD16]

Coordinates

chr3:+:22524475..22530306

Molecular Weight (calculated)

71124.6 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.156

Length

627 amino acids

Sequence
(BLAST)

001: MAGWSRMMTY RSIKRVSKAV DMKVLGSLSR DDFEENFVVK WLNKLLSKMW PYIAEAATMV VRYSVEPLLE DYRPPGITSL KFSKLTLGNK APKIECKIRY
101: SCSKFQGRLS ISTNTCFWLK QLKDLQVFTV ARVIFQLADE IPRISAVVVA LLAEPKPRID YTLKAVRGSL TAIPGLSAMI DDTVDTIVID MLQWPHRIVF
201: PIGGIPVDLS DFELKPQRKL IYKTKAIENN LNPVWDQTFE LIVEDKETQS LTVEVFDKDV GQDERLGLVK LPLSSLEAGV TKELELNLSK MWPYIAETIF
301: RPNGAHRCHN YMKYPNIMKL GEAAILHYTY SKFSDLTARR DRCCCKPKEE DVKICFMLDF DRAISPRNKK FQQGLMSNAT VKSVPFSINN SKGKELKIVG
401: AAMGSDSDRD EIEAMTVQEL KSHIEASLYS FRFSCCFVIV SVDIQILDAN KNLSQLYDFI WTAILPAYGI ENREKRVKQS TEKNLKAKVV SSKDISKEWK
501: NIKPLRVRYG TGLSGSDHDM EGRMVTAEFD SFYLISTYVP NSVDGLKGLV LLKLNAIEDW DRTLSNHIKD LEKSKPVVLT GDLNCAHEEI DIFNPAEAAY
601: LVLSVTLIRV IAMVAAKPTK DTIQKNI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.