Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035570 | Potato | cytosol | 68.7 | 48.13 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 61.07 | 45.33 |
| KRH40562 | Soybean | endoplasmic reticulum | 89.69 | 43.93 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 91.22 | 43.85 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 40.84 | 41.63 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 76.72 | 38.36 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 72.9 | 37.23 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 75.95 | 37.2 |
| Solyc01g094030.2.1 | Tomato | plastid | 67.94 | 35.25 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 65.27 | 34.55 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 65.65 | 33.73 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.5 | 33.47 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.74 | 33.07 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 63.74 | 33.07 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 63.36 | 32.68 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 61.07 | 32.06 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 57.25 | 31.58 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.87 | 31.43 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 56.87 | 31.43 |
| Os07t0409100-01 | Rice | plasma membrane | 61.45 | 31.26 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 60.31 | 31.1 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 60.31 | 31.1 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 60.31 | 31.1 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 56.11 | 31.01 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 55.73 | 30.29 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 59.16 | 28.97 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 59.16 | 28.86 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 54.96 | 28.57 |
| Os03t0251600-00 | Rice | plasma membrane | 56.87 | 28.22 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 54.96 | 28.18 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 55.73 | 28.13 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 50.76 | 26.13 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 51.15 | 26.02 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 50.76 | 25.83 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 49.62 | 25.39 |
| AT3G61030.1 | Thale cress | mitochondrion | 31.3 | 16.11 |
| KRH03623 | Soybean | endoplasmic reticulum | 32.82 | 14.48 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 31.68 | 14.46 |
| AT3G60950.1 | Thale cress | mitochondrion | 33.97 | 14.19 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 23.66 | 11.57 |
| KRH17448 | Soybean | mitochondrion | 22.9 | 11.15 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 22.9 | 11.15 |
| KRH24304 | Soybean | endoplasmic reticulum | 22.52 | 10.95 |
| KRH29282 | Soybean | endoplasmic reticulum | 22.14 | 10.76 |
| KRH34856 | Soybean | extracellular | 21.76 | 10.46 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 21.37 | 10.28 |
| KRG95324 | Soybean | extracellular, plasma membrane | 1.15 | 2.48 |
| KRH15981 | Soybean | extracellular | 1.15 | 1.99 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A0R0JTE2 | EMBL:ACUP02003941 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:CLB_plant | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G241700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000008 | InterPro:IPR035892 |
| EnsemblPlants:KRH55269 | ProteinID:KRH55269 | ProteinID:KRH55269.1 | PFAM:PF00168 | PRINTS:PR00360 | PFscan:PS50004 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0006ED6AB5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:39969957..39971877
Molecular Weight (calculated)
28348.6 Da
IEP (calculated)
7.363
GRAVY (calculated)
-0.046
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFVLFCFLS PLKNELELKP QGTLRAIVIK ANDLKNMEMI GKSDPYAVLY IRPLFKVKTK VIDNNLNPVW NEVFDLIAED KETQSLIVEV FDKDIGQDKR
101: LGIVKLPLND LEPKIEKEFE LRLLSSLDTL KIFYHQFNKE EQLVALEAEK NILEERKKLK EEGVIRTTMD ALDGAASVVR SGVGMVAKLV GTGIGAGAGL
201: VGSGIGAGVG FVGSGLGVVG SGLSRAGKFM GRTITGQGSS RRSDSNTPVN VEEIGGGAKP LQ
101: LGIVKLPLND LEPKIEKEFE LRLLSSLDTL KIFYHQFNKE EQLVALEAEK NILEERKKLK EEGVIRTTMD ALDGAASVVR SGVGMVAKLV GTGIGAGAGL
201: VGSGIGAGVG FVGSGLGVVG SGLSRAGKFM GRTITGQGSS RRSDSNTPVN VEEIGGGAKP LQ
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.