Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15981 | Soybean | extracellular | 90.08 | 72.19 |
| GSMUA_Achr4P18210_001 | Banana | extracellular, plasma membrane | 45.45 | 38.73 |
| KRH34856 | Soybean | extracellular | 79.34 | 17.61 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 76.86 | 17.06 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 57.02 | 12.68 |
| PGSC0003DMT400055528 | Potato | mitochondrion | 52.89 | 11.74 |
| Solyc09g007860.2.1 | Tomato | endoplasmic reticulum | 51.24 | 11.38 |
| Bra009476.1-P | Field mustard | endoplasmic reticulum, extracellular | 50.41 | 11.21 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 48.76 | 10.79 |
| AT5G04220.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 47.11 | 10.56 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 47.11 | 10.48 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 43.8 | 9.85 |
| KRH17448 | Soybean | mitochondrion | 42.15 | 9.48 |
| KRH24304 | Soybean | endoplasmic reticulum | 40.5 | 9.09 |
| KRH29282 | Soybean | endoplasmic reticulum | 39.67 | 8.91 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 35.54 | 8.65 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 38.02 | 8.58 |
| EER88839 | Sorghum | endoplasmic reticulum, extracellular | 36.36 | 8.21 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 36.36 | 8.15 |
| TraesCS7A01G447300.1 | Wheat | extracellular, vacuole | 35.54 | 7.98 |
| HORVU7Hr1G101310.22 | Barley | extracellular, golgi | 34.71 | 7.79 |
| TraesCS7D01G437000.1 | Wheat | extracellular, vacuole | 34.71 | 7.79 |
| TraesCS7B01G347000.3 | Wheat | extracellular, golgi | 35.54 | 7.45 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 22.31 | 5.15 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 23.14 | 5.14 |
| KRH40562 | Soybean | endoplasmic reticulum | 22.31 | 5.05 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 22.31 | 5.05 |
| KRH03623 | Soybean | endoplasmic reticulum | 21.49 | 4.38 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 20.66 | 4.36 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 6.61 | 1.7 |
| KRH55269 | Soybean | cytosol, plasma membrane | 2.48 | 1.15 |
Protein Annotations
| EMBL:ACUP02012101 | EnsemblPlants:KRG95324 | EnsemblPlantsGene:GLYMA_19G143500 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF62 | ProteinID:KRG95324 | ProteinID:KRG95324.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294C971 | UniProt:K7MYE2 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:40459593..40460754
Molecular Weight (calculated)
13539.6 Da
IEP (calculated)
6.243
GRAVY (calculated)
0.235
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVSSFLGI FGFAVGIPLG LLVGFFLFVY SETKHVKDPV VRPISELGPN ALQELLPEIP LWKHDSTDII FAEYIGKYQI KAIDFDELSL GTLPPSVCGK
101: IGSFPPKTQK YAHFRMKIED Y
101: IGSFPPKTQK YAHFRMKIED Y
001: MGFFSTILGF CGFGVGISLG LVIGYVLFVY LLPNDVKDPE IRSIADQDPK AMLRMLPEIP LWVKNPDFDR VDWINRFLEY MWPYLDKAIC KTAKNIAKPI
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQVDI FLLHTSFKSL TCMSKNFFMR ERADETVTFR LANTYEQIKD QVANMYLWPK TLVVPILDPA KAFRRPVGIV
301: HVKVVRAVGL RKKDLMGGAD PFVKIKLSED KIPSKKTTVK HKNLNPEWNE EFKFSVRDPQ TQVLEFSVYD WEQVGNPEKM GMNVLALKEM VPDEHKAFTL
401: ELRKTLDGGE DGQPPDKYRG KLEVELLYKP FTEEEMPKGF EETQAVQKAP EGTPAAGGML VVIVHSAEDV EGKHHTNPYV RIYFKGEERK TKHVKKNRDP
501: RWNEEFTFML EEPPVREKLH VEVLSTSSRI GLLHPKETLG YVDIPVVDVV NNKRMNQKFH LIDSKNGKIQ IELEWRTAS
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQVDI FLLHTSFKSL TCMSKNFFMR ERADETVTFR LANTYEQIKD QVANMYLWPK TLVVPILDPA KAFRRPVGIV
301: HVKVVRAVGL RKKDLMGGAD PFVKIKLSED KIPSKKTTVK HKNLNPEWNE EFKFSVRDPQ TQVLEFSVYD WEQVGNPEKM GMNVLALKEM VPDEHKAFTL
401: ELRKTLDGGE DGQPPDKYRG KLEVELLYKP FTEEEMPKGF EETQAVQKAP EGTPAAGGML VVIVHSAEDV EGKHHTNPYV RIYFKGEERK TKHVKKNRDP
501: RWNEEFTFML EEPPVREKLH VEVLSTSSRI GLLHPKETLG YVDIPVVDVV NNKRMNQKFH LIDSKNGKIQ IELEWRTAS
Arabidopsis Description
SYTASynaptotagmin A [Source:UniProtKB/TrEMBL;Acc:F4IFM6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.