Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95324 | Soybean | extracellular, plasma membrane | 72.19 | 90.08 |
| GSMUA_Achr4P18210_001 | Banana | extracellular, plasma membrane | 52.98 | 56.34 |
| KRH34856 | Soybean | extracellular | 86.75 | 24.04 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 83.44 | 23.12 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 61.59 | 17.1 |
| Bra009476.1-P | Field mustard | endoplasmic reticulum, extracellular | 56.29 | 15.62 |
| PGSC0003DMT400055528 | Potato | mitochondrion | 56.29 | 15.6 |
| Solyc09g007860.2.1 | Tomato | endoplasmic reticulum | 54.97 | 15.23 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 54.97 | 15.17 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.64 | 14.89 |
| AT5G04220.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 52.98 | 14.81 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 50.33 | 14.13 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 46.36 | 14.08 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 48.34 | 13.52 |
| KRH17448 | Soybean | mitochondrion | 47.68 | 13.38 |
| EER88839 | Sorghum | endoplasmic reticulum, extracellular | 47.02 | 13.25 |
| TraesCS7A01G447300.1 | Wheat | extracellular, vacuole | 47.02 | 13.17 |
| KRH24304 | Soybean | endoplasmic reticulum | 46.36 | 12.99 |
| TraesCS7D01G437000.1 | Wheat | extracellular, vacuole | 46.36 | 12.99 |
| HORVU7Hr1G101310.22 | Barley | extracellular, golgi | 46.36 | 12.99 |
| KRH29282 | Soybean | endoplasmic reticulum | 45.7 | 12.8 |
| TraesCS7B01G347000.3 | Wheat | extracellular, golgi | 47.02 | 12.3 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 43.05 | 12.13 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 27.81 | 8.02 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 28.48 | 7.89 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 27.81 | 7.85 |
| KRH40562 | Soybean | endoplasmic reticulum | 27.81 | 7.85 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 23.84 | 6.27 |
| KRH03623 | Soybean | endoplasmic reticulum | 23.18 | 5.89 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 8.61 | 2.76 |
| KRH55269 | Soybean | cytosol, plasma membrane | 1.99 | 1.15 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0GCE7 | EMBL:ACUP02008746 | EnsemblPlantsGene:GLYMA_14G124000 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR031468 | EnsemblPlants:KRH15981 | ProteinID:KRH15981 | ProteinID:KRH15981.1 | PFscan:PS51847 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF62 | InterPro:SMP_LBD | TMHMM:TMhelix | UniParc:UPI0006EE17D2 | SEG:seg |
Description
hypothetical protein
Coordinates
chr14:+:18874769..18875932
Molecular Weight (calculated)
17105.1 Da
IEP (calculated)
7.407
GRAVY (calculated)
0.185
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVSSFLGV LGFAVGIPLG LLVGFFLFVY SKTKHVKDPV VRPISELGPN ALQELLPEIP LWVKTPDYER VDWLNKFLLD MWPFLDTAIC KIIRSTTQPI
101: FAEYTGKYQI KAIDFDELSL GTLPPTVCGK IGSFPPKTQK YAHFQMKIED Y
101: FAEYTGKYQI KAIDFDELSL GTLPPTVCGK IGSFPPKTQK YAHFQMKIED Y
001: MGFFSTILGF CGFGVGISLG LVIGYVLFVY LLPNDVKDPE IRSIADQDPK AMLRMLPEIP LWVKNPDFDR VDWINRFLEY MWPYLDKAIC KTAKNIAKPI
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQEQI KDQVANMYLW PKTLVVPILD PAKAFRRPVG IVHVKVVRAV GLRKKDLMGG ADPFVKIKLS EDKIPSKKTT
301: VKHKNLNPEW NEEFKFSVRD PQTQVLEFSV YDWEQVGNPE KMGMNVLALK EMVPDEHKAF TLELRKTLDG GEDGQPPDKY RGKLEVELLY KPFTEEEMPK
401: GFEETQAVQK APEGTPAAGG MLVVIVHSAE DVEGKHHTNP YVRIYFKGEE RKTKHVKKNR DPRWNEEFTF MLEEPPVREK LHVEVLSTSS RIGLLHPKET
501: LGYVDIPVVD VVNNKRMNQK FHLIDSKNGK IQIELEWRTA S
101: IEEQIPKYKI DSVEFETLTL GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKATVQVV DLQVFAQPRI TLKPLVPSFP CFANIYVSLM
201: EKPHVDFGLK LGGADLMSIP GLYRFVQEQI KDQVANMYLW PKTLVVPILD PAKAFRRPVG IVHVKVVRAV GLRKKDLMGG ADPFVKIKLS EDKIPSKKTT
301: VKHKNLNPEW NEEFKFSVRD PQTQVLEFSV YDWEQVGNPE KMGMNVLALK EMVPDEHKAF TLELRKTLDG GEDGQPPDKY RGKLEVELLY KPFTEEEMPK
401: GFEETQAVQK APEGTPAAGG MLVVIVHSAE DVEGKHHTNP YVRIYFKGEE RKTKHVKKNR DPRWNEEFTF MLEEPPVREK LHVEVLSTSS RIGLLHPKET
501: LGYVDIPVVD VVNNKRMNQK FHLIDSKNGK IQIELEWRTA S
Arabidopsis Description
SYTASynaptotagmin A [Source:UniProtKB/TrEMBL;Acc:F4IFM6]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.