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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
 extracellular: 25724908
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG91923 Soybean endoplasmic reticulum, extracellular, plasma membrane 93.94 93.94
KRH15981 Soybean extracellular 24.04 86.75
KRG95324 Soybean extracellular, plasma membrane 17.61 79.34
VIT_13s0019g04450.t01 Wine grape endoplasmic reticulum, extracellular 72.29 72.43
AT5G04220.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 64.04 64.63
Bra009476.1-P Field mustard endoplasmic reticulum, extracellular 64.4 64.52
CDX70250 Canola endoplasmic reticulum, extracellular 64.04 63.8
CDY41389 Canola endoplasmic reticulum, extracellular, plasma membrane 63.67 63.79
PGSC0003DMT400055528 Potato mitochondrion 62.94 62.94
Solyc09g007860.2.1 Tomato endoplasmic reticulum 62.2 62.2
GSMUA_Achr4P18210_001 Banana extracellular, plasma membrane 15.78 60.56
Os06t0685300-00 Rice endoplasmic reticulum, extracellular 57.8 58.33
KRH05967 Soybean endoplasmic reticulum, extracellular 57.25 57.99
KRH17448 Soybean mitochondrion 56.7 57.43
KRH24304 Soybean endoplasmic reticulum 55.78 56.4
KRH29282 Soybean endoplasmic reticulum 55.78 56.4
GSMUA_Achr4P18220_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 48.62 56.26
EER88839 Sorghum endoplasmic reticulum, extracellular 55.23 56.16
HORVU7Hr1G101310.22 Barley extracellular, golgi 55.41 56.03
KRH51399 Soybean endoplasmic reticulum, extracellular, plasma membrane 55.05 55.97
TraesCS7A01G447300.1 Wheat extracellular, vacuole 55.23 55.84
TraesCS7D01G437000.1 Wheat extracellular, vacuole 55.23 55.84
TraesCS7B01G347000.3 Wheat extracellular, golgi 55.78 52.69
Zm00001d014499_P004 Maize endoplasmic reticulum, extracellular 45.87 50.3
KRH52409 Soybean endoplasmic reticulum, extracellular 29.17 27.7
KRH03623 Soybean endoplasmic reticulum 28.62 26.26
KRH48321 Soybean endoplasmic reticulum, mitochondrion 25.14 26.14
KRH40562 Soybean endoplasmic reticulum 25.14 25.61
KRH65210 Soybean endoplasmic reticulum, mitochondrion 25.14 25.61
KRH00619 Soybean mitochondrion, plasma membrane 25.5 25.5
KRH55269 Soybean cytosol, plasma membrane 10.46 21.76
Protein Annotations
EntrezGene:100813029Gene3D:2.60.40.150MapMan:5.8.1.2EMBL:ACUP02006639InterPro:C2_domInterPro:C2_domain_sf
EnsemblPlantsGene:GLYMA_10G210000GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0006810GO:GO:0006869GO:GO:0008150GO:GO:0008289
GO:GO:0016020GO:GO:0016021UniProt:I1LD00InterPro:IPR000008InterPro:IPR031468InterPro:IPR035892
EnsemblPlants:KRH34856ProteinID:KRH34856ProteinID:KRH34856.1PFAM:PF00168PFAM:PF17047PRINTS:PR00360
PFscan:PS50004PFscan:PS51847PANTHER:PTHR10774PANTHER:PTHR10774:SF62SMART:SM00239InterPro:SMP_LBD
SUPFAM:SSF49562InterPro:Synaptotagmin_SMPTMHMM:TMhelixUniParc:UPI000233D7E8SEG:seg:
Description
hypothetical protein
Coordinates
chr10:+:44196098..44201503
Molecular Weight (calculated)
62129.1 Da
IEP (calculated)
8.405
GRAVY (calculated)
-0.156
Length
545 amino acids
Sequence
(BLAST)
001: MGFLSSFLGV FGFAVGIPLG LLVGFFLFVY SETKRVKDPV VRPISELGPN SLQELLPEIP LWVKTPDYER VDWLNKFLLD MWPFLDTAIC KIIRSTTQPI
101: FAEYIGKYQI KAIDFDELSL GTLPPTVCGM KVLETNEKEL VMEQVIKWAG NPNIVVSLYV SSLKITIQLV DLQIFAAPRI TLRPLVPTFP CFANIVVSLM
201: EKPHVDFGMN VSGGDIMSIP GLYRFVQETI KKQVANLYLW PQTLEIPILD ESTVAIKKPV GILHVNVVRA QKLLKMDLLG TSDPYVKLSL TGDKLPAKKT
301: TVKRKNLNPE WNEKFKIVVK DPQSQVLQLQ VYDWDKVGGH DKLGMQLVPL KVLNPYENKE FILDLLKDTN LNETPHKKPR GKIVVDLTFV PFKEDSNKFG
401: GPSEGYSRKE SGIDIVSDDE VQEGAGLLSI VIQEAEEVEG DHHNNPFAVL TFRGEKKRTK TMKKTRHPRW NEEFQFMLEE PPLHEKIHIE VMSKRKNFSF
501: LPKESLGHVE INLRDVVHNG RINDKYHLIN SRNGVMHVEI RWKVV
Best Arabidopsis Sequence Match ( AT5G04220.2 )
(BLAST)
001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
Arabidopsis Description
SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.