Factsheet for TraesCS7D01G437000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	98.14	98.14
HORVU7Hr1G101310.22	Barley	extracellular, golgi	95.55	95.55
TraesCS7B01G347000.3	Wheat	extracellular, golgi	96.85	90.47
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	82.19	82.04
EER88839	Sorghum	endoplasmic reticulum, extracellular	79.96	80.41
Zm00001d014499_P004	Maize	endoplasmic reticulum, extracellular	66.6	72.23
VIT_18s0001g14590.t01	Wine grape	cytosol	11.32	66.3
VIT_09s0018g01580.t01	Wine grape	cytosol	11.13	65.22
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	54.17	62.0
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	13.73	61.16
VIT_10s0003g03240.t01	Wine grape	mitochondrion	13.73	61.16
VIT_13s0019g04450.t01	Wine grape	endoplasmic reticulum, extracellular	57.7	57.17
KRG91923	Soybean	endoplasmic reticulum, extracellular, plasma membrane	56.96	56.33
KRH34856	Soybean	extracellular	55.84	55.23
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	54.92	54.11
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	53.99	53.89
PGSC0003DMT400055528	Potato	mitochondrion	53.99	53.39
Solyc09g007860.2.1	Tomato	endoplasmic reticulum	53.62	53.03
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	53.25	52.76
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.88	52.39
CDX70250	Canola	endoplasmic reticulum, extracellular	53.06	52.29
TraesCS5D01G336200.1	Wheat	endoplasmic reticulum	51.39	51.39
TraesCS5D01G336100.1	Wheat	cytosol	26.72	46.6
KRH15981	Soybean	extracellular	12.99	46.36
KRG95324	Soybean	extracellular, plasma membrane	7.79	34.71
TraesCS6D01G083600.2	Wheat	endoplasmic reticulum, extracellular	29.68	28.47
TraesCS2D01G518800.1	Wheat	endoplasmic reticulum, extracellular, plastid	28.2	26.67
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.49	25.63
TraesCS2D01G242600.1	Wheat	plasma membrane	22.63	24.02

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047
PRINTS:PR00360	PFscan:PS50004	PFscan:PS51257	PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF62
SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G437000
EnsemblPlants:TraesCS7D01G437000.1	TIGR:cd00030	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:-:556310007..556317091

Molecular Weight (calculated)

61721.0 Da

IEP (calculated)

9.595

GRAVY (calculated)

-0.190

Length

539 amino acids

Sequence
(BLAST)

001: MRLVGGLLGF GLGLPLGLAA ACLVYLRFFA PRRRLQDPVV RPLRDLDYET LQTMVQDIPL WVKYPDYERI DWMNKFICDM WPFLDKAMCK IIRGVAKPIC
101: DQYVGKYGIE SIEFGNLTLG ALPPTLQGIK VYEMREKELV IEPVIRWASI ANVTVDVKVH SFKLSAQLLD LHVMLTPRVT LKPLVPSFPC FASLCVSLME
201: KPHVDFGLKL LGGDVMAIPG LYRFIQEQIS KQIAILYHWP KVIEVPILDG ASGATKKPVG VLNVKVIRAM NLPKMDLLGK SDPYVKLRLS GERLPSKKTS
301: VKMSNLNPEW NEHFRLVVKD PETQVLELQM FDWEKVKMHD KMGVQVIPLR LLTPYESKLF TLDLLRSMNP NDQQNKKNRG KLVVELTFDP FREENSTSPL
401: ISDGEGNISL KRDVPDGGGV LLVSVENAED VEGKRHTNPY AVVLFRGEKR ETKVIRKARD PRWNEEFQFV VDEAPMDEKI HIEIRSRRRR LLPFRTQESL
501: GHVNINLVDV VNNGRINEKY HLINSRNGKL QLEIKWNTV

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.