Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 79.66 | 85.92 |
| Os06t0685300-00 | Rice | endoplasmic reticulum, extracellular | 83.4 | 82.78 |
| HORVU7Hr1G101310.22 | Barley | extracellular, golgi | 80.41 | 79.96 |
| TraesCS7D01G437000.1 | Wheat | extracellular, vacuole | 80.41 | 79.96 |
| TraesCS7A01G447300.1 | Wheat | extracellular, vacuole | 80.04 | 79.59 |
| TraesCS7B01G347000.3 | Wheat | extracellular, golgi | 80.97 | 75.22 |
| VIT_18s0001g14590.t01 | Wine grape | cytosol | 11.57 | 67.39 |
| VIT_09s0018g01580.t01 | Wine grape | cytosol | 11.38 | 66.3 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 55.04 | 62.63 |
| VIT_12s0055g01250.t01 | Wine grape | cytosol, mitochondrion | 13.43 | 59.5 |
| VIT_10s0003g03240.t01 | Wine grape | mitochondrion | 13.43 | 59.5 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 58.58 | 57.72 |
| VIT_08s0040g01740.t01 | Wine grape | endoplasmic reticulum, extracellular | 56.72 | 55.58 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 56.34 | 55.41 |
| KRH34856 | Soybean | extracellular | 56.16 | 55.23 |
| AT5G04220.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 55.41 | 55.0 |
| PGSC0003DMT400055528 | Potato | mitochondrion | 55.6 | 54.68 |
| Solyc09g007860.2.1 | Tomato | endoplasmic reticulum | 55.22 | 54.31 |
| Bra009476.1-P | Field mustard | endoplasmic reticulum, extracellular | 55.04 | 54.23 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.66 | 53.86 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 54.85 | 53.75 |
| OQU92056 | Sorghum | endoplasmic reticulum | 52.24 | 51.95 |
| EER99265 | Sorghum | endoplasmic reticulum | 52.05 | 51.76 |
| KRH15981 | Soybean | extracellular | 13.25 | 47.02 |
| KRG95324 | Soybean | extracellular, plasma membrane | 8.21 | 36.36 |
| KXG36798 | Sorghum | cytosol | 25.56 | 27.35 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 24.44 | 25.64 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 24.07 | 25.39 |
| EES11541 | Sorghum | extracellular, golgi | 27.24 | 25.35 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 23.69 | 25.2 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:5.8.1.2 | EntrezGene:8077742 | InterPro:C2_dom | InterPro:C2_domain_sf | UniProt:C5Z8A3 |
| EnsemblPlants:EER88839 | ProteinID:EER88839 | ProteinID:EER88839.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF62 | SMART:SM00239 | InterPro:SMP_LBD |
| EnsemblPlantsGene:SORBI_3010G236100 | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0001A88FE0 | RefSeq:XP_002437472.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:57839267..57846837
Molecular Weight (calculated)
61490.2 Da
IEP (calculated)
9.366
GRAVY (calculated)
-0.233
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLVGGVLGF CLGVPIGLAA AYFVYLRYFA AARRLQDPVI KPLRDLDSET LQATIPDIPL WVKSPDYERI DWMNKFIFDM WPFLDKAICN NIKRATRPIF
101: DQYVGQYGIE SIEFGQLTLG ALPPTFQGIK VYEMLEKELV IEPVIRWAST SNVTVNAKVH SFKVTVQLED LHIMLKPRVT LKSLVPSFPC FANLCVSLME
201: KPRIDFGFKL LGGDVMAIPV LYQYVQDQIS KQISILYHWP KVIQIPILDG ASGATKKPVG ILHVKVIKAL NLLKMDFLGK SDPYVKMRLS GERLPWKKTS
301: VKMSNLNPEW NEHFRFIVKD PDTQVLELHM FDWEKVKMHD KLGMQVIPLR LLTPYESKLF TLDLVRSMNP NDPQNKKNRG KLIVELTFDP FREDNMSSDG
401: EGNASVRREA DGECSGGVLL VSVENAEDVE GKRHTNPYAE VLFRGERKKT KVIRKTRDPR WSEEFQFMVD EPPVEDKIHI EVKSKRRGLP FRNKESLGHV
501: NINLVDVVNN GRINEKYHLI NSRNGMIHVE IKWNTV
101: DQYVGQYGIE SIEFGQLTLG ALPPTFQGIK VYEMLEKELV IEPVIRWAST SNVTVNAKVH SFKVTVQLED LHIMLKPRVT LKSLVPSFPC FANLCVSLME
201: KPRIDFGFKL LGGDVMAIPV LYQYVQDQIS KQISILYHWP KVIQIPILDG ASGATKKPVG ILHVKVIKAL NLLKMDFLGK SDPYVKMRLS GERLPWKKTS
301: VKMSNLNPEW NEHFRFIVKD PDTQVLELHM FDWEKVKMHD KLGMQVIPLR LLTPYESKLF TLDLVRSMNP NDPQNKKNRG KLIVELTFDP FREDNMSSDG
401: EGNASVRREA DGECSGGVLL VSVENAEDVE GKRHTNPYAE VLFRGERKKT KVIRKTRDPR WSEEFQFMVD EPPVEDKIHI EVKSKRRGLP FRNKESLGHV
501: NINLVDVVNN GRINEKYHLI NSRNGMIHVE IKWNTV
001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
Arabidopsis Description
SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.