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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • cytosol 3
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0001g14590.t01 Wine grape cytosol 13.24 78.26
VIT_09s0018g01580.t01 Wine grape cytosol 12.87 76.09
VIT_10s0003g03240.t01 Wine grape mitochondrion 16.54 74.38
VIT_12s0055g01250.t01 Wine grape cytosol, mitochondrion 16.36 73.55
KRH34856 Soybean extracellular 72.43 72.29
KRG91923 Soybean endoplasmic reticulum, extracellular, plasma membrane 71.51 71.38
VIT_08s0040g01740.t01 Wine grape endoplasmic reticulum, extracellular 70.4 70.02
AT5G04220.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane 65.26 65.74
GSMUA_Achr4P18210_001 Banana extracellular, plasma membrane 17.1 65.49
Bra009476.1-P Field mustard endoplasmic reticulum, extracellular 63.79 63.79
CDY41389 Canola endoplasmic reticulum, extracellular, plasma membrane 63.42 63.42
CDX70250 Canola endoplasmic reticulum, extracellular 63.42 63.07
KRH15981 Soybean extracellular 17.1 61.59
GSMUA_Achr4P18220_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 52.57 60.72
VIT_18s0001g14630.t01 Wine grape endoplasmic reticulum, extracellular 59.74 60.3
VIT_03s0038g02330.t01 Wine grape endoplasmic reticulum 59.56 60.11
Os06t0685300-00 Rice endoplasmic reticulum, extracellular 58.64 59.07
EER88839 Sorghum endoplasmic reticulum, extracellular 57.72 58.58
TraesCS7A01G447300.1 Wheat extracellular, vacuole 57.35 57.88
HORVU7Hr1G101310.22 Barley extracellular, golgi 57.35 57.88
TraesCS7D01G437000.1 Wheat extracellular, vacuole 57.17 57.7
KRG95324 Soybean extracellular, plasma membrane 12.68 57.02
TraesCS7B01G347000.3 Wheat extracellular, golgi 57.54 54.25
Zm00001d014499_P004 Maize endoplasmic reticulum, extracellular 47.98 52.52
VIT_04s0008g05740.t01 Wine grape endoplasmic reticulum 29.6 28.25
VIT_11s0118g00230.t01 Wine grape endoplasmic reticulum, extracellular 28.31 27.16
VIT_15s0048g01410.t01 Wine grape endoplasmic reticulum, extracellular 25.37 26.9
Protein Annotations
EntrezGene:100258229wikigene:100258229Gene3D:2.60.40.150MapMan:5.8.1.2InterPro:C2_domInterPro:C2_domain_sf
ProteinID:CBI31446ProteinID:CBI31446.3UniProt:D7TM79EMBL:FN595998GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0006810
GO:GO:0006869GO:GO:0008150GO:GO:0008289GO:GO:0016020GO:GO:0016021InterPro:IPR000008
InterPro:IPR031468InterPro:IPR035892EntrezGene:LOC100258229wikigene:LOC100258229PFAM:PF00168PFAM:PF17047
PRINTS:PR00360PFscan:PS50004PFscan:PS51847PANTHER:PTHR10774PANTHER:PTHR10774:SF62SMART:SM00239
InterPro:SMP_LBDSUPFAM:SSF49562InterPro:Synaptotagmin_SMPTMHMM:TMhelixUniParc:UPI00019848B6ArrayExpress:VIT_13s0019g04450
EnsemblPlantsGene:VIT_13s0019g04450EnsemblPlants:VIT_13s0019g04450.t01unigene:Vvi.17782RefSeq:XP_002272997RefSeq:XP_002272997.1SEG:seg
Description
No Description!
Coordinates
chr13:-:5848116..5852273
Molecular Weight (calculated)
62141.2 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.159
Length
544 amino acids
Sequence
(BLAST)
001: MGFLSSLLDI VGFGIGIPFG LLVGFFLFVY SQPKDVQDPD VRPLSELDSS TLMDLLPELP FWVKNPNYDR VDWLNKFILN MWPYLDKAIC DTIRSMAQPI
101: FAEYIGMYQI EAIEFEKLSL GTLPPILHGI KVYETNEKEL AMEPAIKWAG NPNIILVLKW LPFRITIQLV DLQIFAAPRI TLKPLVPTFP CFASLVLSLM
201: EKPHVDFGLK ILGGDIMSIP GLYRFVQETI KREVAKLYLW PQTLEIPILD AATGAIKKPV GILHVKVVRA LKLLKMDFLG ASDPYVKLSL SGERLPAKKT
301: TVKRKNLNPE WNEKFKLIVR DPQAQVLQLY VYDWDKVGAH DKLGMQLVPL KLLTPHETQE FTLDLFKNTN LSDPQQKQRG KIVVELTFDP FKEDHECYSG
401: PLDGYGRKES RISRASDDDT PSGAGLLLVT IQGAEDVEGQ RHNNPYAVIL FRGEKKKTKM MKKTRDPQWN EEFQFMLEEP PLSEKIHIQV ISQRSGIGFR
501: SKESMGHVDI DLTDVVHNGR INHKYHLINS KNGQIHLEIK WKMI
Best Arabidopsis Sequence Match ( AT5G04220.2 )
(BLAST)
001: MGFFTSVLGI IGFVIGIPIG LILGFFVLIY SQPSHQEYPP ARPLVETSIS VLLDLLPDIP LWMKNPDYER VDWFNKFISY MWPYLDKAVC GIIRSSVQPL
101: FADYIGTFCI ESIEFENLSL GTLPPTVHGV KFYETNEKEL LFEPSIKWAG NPNIVLVLKV LSLRIRVQLV DLQFFAIVRV ALKPLLPTFP CFGMVVVSLM
201: EKPHVDFGLK VLGGDLMSIP GLYRYVQETI KRQVSSMYHW PQVLEIPILD SSTASVKKPV GLLHVSILRA RNLLKKDLLG TSDPYVKLSL TGEKLPAKKT
301: TIKKRNLNPE WNEHFKLIVK DPNSQVLQLE VFDWDKVGGH DRLGMQMIPL QKINPGERKE FNLDLIKNSN VVMDSGDKKK RGRLEVDLRY VPFREESIKR
401: RKESREEKSS EDDDFLSQAG LLSVAVQSAK DVEGKKKHSN PYAVVLFRGE KKKTKMLKKT RDPRWNEEFQ FTLEEPPVKE SIRVEVMSKG TGFHFRSKEE
501: LGHVDINLDD VVDNGRINQK YHLINSRNGI IHIEIRWTTS
Arabidopsis Description
SYT3Synaptotagmin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.