Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 83.86 | 84.01 |
| KRH17448 | Soybean | mitochondrion | 83.67 | 83.83 |
| VIT_03s0038g02330.t01 | Wine grape | endoplasmic reticulum | 78.85 | 78.85 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 77.92 | 78.07 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 77.18 | 77.32 |
| AT1G20080.3 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 76.99 | 77.28 |
| Bra016478.1-P | Field mustard | endoplasmic reticulum, extracellular | 71.99 | 76.23 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 75.88 | 76.02 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 77.37 | 75.96 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 77.18 | 75.77 |
| EER99265 | Sorghum | endoplasmic reticulum | 75.7 | 75.7 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 74.4 | 75.38 |
| Zm00001d006238_P001 | Maize | plasma membrane | 75.32 | 75.32 |
| PGSC0003DMT400075422 | Potato | endoplasmic reticulum, extracellular | 75.32 | 75.32 |
| Bra012209.1-P | Field mustard | cytosol | 53.8 | 75.13 |
| Solyc12g089330.1.1 | Tomato | endoplasmic reticulum, extracellular | 72.73 | 74.67 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 76.07 | 74.28 |
| OQU92056 | Sorghum | endoplasmic reticulum | 74.21 | 74.21 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 74.03 | 74.03 |
| TraesCS5A01G330400.1 | Wheat | golgi | 73.47 | 73.47 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 73.47 | 73.47 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 73.84 | 71.97 |
| Zm00001d030116_P001 | Maize | cytosol | 40.26 | 71.62 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 64.19 | 65.16 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 37.11 | 64.72 |
| HORVU5Hr1G084020.3 | Barley | cytosol | 25.6 | 63.3 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 34.51 | 63.27 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 73.84 | 62.28 |
| VIT_18s0001g14590.t01 | Wine grape | cytosol | 10.39 | 60.87 |
| VIT_09s0018g01580.t01 | Wine grape | cytosol | 10.2 | 59.78 |
| VIT_13s0019g04450.t01 | Wine grape | endoplasmic reticulum, extracellular | 60.3 | 59.74 |
| VIT_10s0003g03240.t01 | Wine grape | mitochondrion | 13.17 | 58.68 |
| VIT_12s0055g01250.t01 | Wine grape | cytosol, mitochondrion | 13.17 | 58.68 |
| VIT_08s0040g01740.t01 | Wine grape | endoplasmic reticulum, extracellular | 56.03 | 55.21 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 30.06 | 28.42 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 29.5 | 28.04 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 23.93 | 25.15 |
Protein Annotations
| EntrezGene:100260940 | wikigene:100260940 | Gene3D:2.60.40.150 | MapMan:5.8.1.2 | EMBL:AM488526 | InterPro:C2_dom |
| InterPro:C2_domain_sf | ProteinID:CAN71066 | ProteinID:CAN71066.1 | ProteinID:CBI19897 | ProteinID:CBI19897.3 | UniProt:E0CQ92 |
| EMBL:FN595227 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | EntrezGene:LOC100260940 | wikigene:LOC100260940 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 | SMART:SM00239 | InterPro:SMP_LBD |
| SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI00015C74C9 | ArrayExpress:VIT_18s0001g14630 | EnsemblPlantsGene:VIT_18s0001g14630 |
| EnsemblPlants:VIT_18s0001g14630.t01 | unigene:Vvi.15422 | unigene:Vvi.25655 | RefSeq:XP_002272757 | RefSeq:XP_002272757.1 | RefSeq:XP_003634391 |
| RefSeq:XP_003634391.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:12682841..12691610
Molecular Weight (calculated)
61395.1 Da
IEP (calculated)
7.300
GRAVY (calculated)
-0.273
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVSTILGF CGFGVGISIG LFIGYYLFIY FQPTDVKDPI VRPLVEQDSK TLQRLLPEIP QWVKNPDYDR VDWLNKFIEN MWPYLDKAIC KTAKNIAKPI
101: IAEQIPKYKI DSVEFEALTL GSLPPTFQGM KVYATDEKEL IMELSMKWAG NPNITVAVKA FGLRATVQVV DLQVFAAPRI TLKPLVPSFP CFANIFVSLM
201: EKPHVDFGLK LLGADVMAIP GLYRLVQELI KDQVANMYLW PKTLEVPIMD PAKAMKKPVG ILSVKVVRAM KLKKKDIMGA SDPYVKMKLS EDKLPSKKTT
301: VKHKNLNPEW NEEFNMVVKD PESQALEVIV YDWEQVGKHD KMGMNVIPLK ELTPDEPKVL TLDLLKNMDP NDVQNEKSRG QIVLEALYKP FKDTEIPKDL
401: EDPNAIEKAP EGTPAGGGLL VIIVHEAQEV EGKHHTNPYV RLLFRGEERK TKYVKKNRDP RWEEEFQFML EEPPTNDRIH VEVVSTSSRM GLLHPKETLG
501: YVDINLSDVV SNKRINEKYH LIDSKNGKIQ IELQWRTST
101: IAEQIPKYKI DSVEFEALTL GSLPPTFQGM KVYATDEKEL IMELSMKWAG NPNITVAVKA FGLRATVQVV DLQVFAAPRI TLKPLVPSFP CFANIFVSLM
201: EKPHVDFGLK LLGADVMAIP GLYRLVQELI KDQVANMYLW PKTLEVPIMD PAKAMKKPVG ILSVKVVRAM KLKKKDIMGA SDPYVKMKLS EDKLPSKKTT
301: VKHKNLNPEW NEEFNMVVKD PESQALEVIV YDWEQVGKHD KMGMNVIPLK ELTPDEPKVL TLDLLKNMDP NDVQNEKSRG QIVLEALYKP FKDTEIPKDL
401: EDPNAIEKAP EGTPAGGGLL VIIVHEAQEV EGKHHTNPYV RLLFRGEERK TKYVKKNRDP RWEEEFQFML EEPPTNDRIH VEVVSTSSRM GLLHPKETLG
501: YVDINLSDVV SNKRINEKYH LIDSKNGKIQ IELQWRTST
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.