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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G330500.1 Wheat cytosol 76.24 78.57
TraesCS5D01G336100.1 Wheat cytosol 79.21 77.67
HORVU5Hr1G084020.3 Barley cytosol 53.14 73.85
AT2G21010.1 Thale cress cytosol 48.84 57.81
OQU92056 Sorghum endoplasmic reticulum 94.39 53.06
Zm00001d006238_P001 Maize plasma membrane 90.43 50.83
Bra012209.1-P Field mustard cytosol 63.7 50.0
Os09t0538800-01 Rice plasma membrane 88.12 49.54
TraesCS5D01G336200.1 Wheat endoplasmic reticulum 85.48 48.05
HORVU5Hr1G084010.1 Barley endoplasmic reticulum, extracellular 85.15 47.87
TraesCS5A01G330400.1 Wheat golgi 84.82 47.68
TraesCS5B01G330600.1 Wheat endoplasmic reticulum 85.48 46.84
Zm00001d022625_P006 Maize cytosol, peroxisome, plastid 90.43 42.88
VIT_18s0001g14630.t01 Wine grape endoplasmic reticulum, extracellular 71.62 40.26
KRH29282 Soybean endoplasmic reticulum 70.3 39.52
KRH05967 Soybean endoplasmic reticulum, extracellular 69.97 39.41
KRH17448 Soybean mitochondrion 69.64 39.22
KRH24304 Soybean endoplasmic reticulum 69.31 38.96
VIT_03s0038g02330.t01 Wine grape endoplasmic reticulum 68.98 38.78
Solyc12g089330.1.1 Tomato endoplasmic reticulum, extracellular 67.0 38.67
KRH51399 Soybean endoplasmic reticulum, extracellular, plasma membrane 67.66 38.25
PGSC0003DMT400015793 Potato endoplasmic reticulum 67.99 38.22
Solyc01g111520.2.1 Tomato nucleus 67.66 38.03
PGSC0003DMT400075422 Potato endoplasmic reticulum, extracellular 67.0 37.66
CDY43415 Canola endoplasmic reticulum, extracellular 66.67 37.55
AT1G20080.3 Thale cress endoplasmic reticulum, extracellular, plasma membrane 65.02 36.69
CDY54339 Canola endoplasmic reticulum, extracellular 66.34 36.61
CDY62938 Canola endoplasmic reticulum, extracellular 66.01 36.43
CDY57593 Canola endoplasmic reticulum, extracellular 65.35 35.87
CDY13846 Canola endoplasmic reticulum, extracellular 62.71 35.12
Bra031157.1-P Field mustard endoplasmic reticulum, extracellular 62.71 35.12
CDX81995 Canola endoplasmic reticulum, extracellular 62.38 34.94
Bra016478.1-P Field mustard endoplasmic reticulum, extracellular 57.43 34.18
AT2G20990.3 Thale cress endoplasmic reticulum, extracellular 62.05 32.47
Os01t0819200-00 Rice endoplasmic reticulum, extracellular 25.08 24.92
AT2G21040.1 Thale cress cytosol 21.45 24.9
Zm00001d014499_P004 Maize endoplasmic reticulum, extracellular 37.29 22.74
Zm00001d002090_P001 Maize endoplasmic reticulum, extracellular, plastid 31.02 16.32
Zm00001d007034_P008 Maize endoplasmic reticulum, extracellular, plasma membrane 31.02 16.01
Zm00001d019472_P005 Maize endoplasmic reticulum, mitochondrion, plasma membrane 25.08 14.21
Zm00001d028437_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 24.09 14.07
Protein Annotations
EMBL:BT061465EnsemblPlants:Zm00001d030116_P001EnsemblPlants:Zm00001d030116_T001EnsemblPlantsGene:Zm00001d030116EntrezGene:100192771Gene3D:2.60.40.150
InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008InterPro:IPR035892PANTHER:PTHR10774PANTHER:PTHR10774:SF50
PFAM:PF00168PFscan:PS50004PRINTS:PR00360ProteinID:ONM00330.1SMART:SM00239SUPFAM:SSF49562
UniParc:UPI000182BFC6UniProt:C0HGK9MapMan:35.1:::
Description
Synaptotagmin-2
Coordinates
chr1:+:107042927..107056687
Molecular Weight (calculated)
34626.6 Da
IEP (calculated)
7.167
GRAVY (calculated)
-0.713
Length
303 amino acids
Sequence
(BLAST)
001: MYLWPKALEV PIMDPSKASK KPVGILLVKV VRAQNLRKKD LLGKSDPYVK LKMSDDKLPS KKTTVKRSNL NPEWDEEFKF VVTDPESQSL EVNVFDWEQV
101: GKHEKMGMNM VPLKDLPPEE TKFTTLNLLK TMDPNDVQNE KSRGQLTLEV TYKPFKEADV ETEDTEGTNV IEKAPDGTPA GGGLLYVIVH EAKDLEGKHH
201: TNPYAKIIFK GEEKKTRVIK KNRDPRWEDG FEFVCEEPPV NDKLHVEVLS KAPKKGLIYG KETLGYIDVN LADVISNKRI NEKYHLIDSK NGQIQIELQW
301: RTS
Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.