Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016478.1-P | Field mustard | endoplasmic reticulum, extracellular | 92.17 | 99.41 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 98.0 | 98.0 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 89.25 | 91.08 |
| AT1G20080.3 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 89.07 | 91.06 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 88.89 | 88.41 |
| VIT_18s0001g14630.t01 | Wine grape | endoplasmic reticulum, extracellular | 75.96 | 77.37 |
| KRH17448 | Soybean | mitochondrion | 73.04 | 74.54 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 72.68 | 74.16 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 72.13 | 73.61 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 69.95 | 71.38 |
| PGSC0003DMT400075422 | Potato | endoplasmic reticulum, extracellular | 68.12 | 69.39 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 67.03 | 69.17 |
| Zm00001d006238_P001 | Maize | plasma membrane | 67.03 | 68.27 |
| EER99265 | Sorghum | endoplasmic reticulum | 67.03 | 68.27 |
| OQU92056 | Sorghum | endoplasmic reticulum | 66.85 | 68.09 |
| HORVU5Hr1G084010.1 | Barley | endoplasmic reticulum, extracellular | 66.85 | 68.09 |
| Solyc12g089330.1.1 | Tomato | endoplasmic reticulum, extracellular | 65.03 | 68.0 |
| TraesCS5A01G330400.1 | Wheat | golgi | 66.12 | 67.35 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 66.3 | 67.28 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 66.3 | 67.28 |
| TraesCS5D01G336200.1 | Wheat | endoplasmic reticulum | 65.94 | 67.16 |
| Zm00001d030116_P001 | Maize | cytosol | 36.43 | 66.01 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 65.94 | 65.46 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 59.38 | 61.39 |
| TraesCS5D01G336100.1 | Wheat | cytosol | 33.52 | 59.55 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 31.51 | 58.84 |
| HORVU5Hr1G084020.3 | Barley | cytosol | 23.13 | 58.26 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 65.39 | 56.18 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.73 | 50.18 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 49.54 | 49.73 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 31.51 | 30.95 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 31.33 | 30.18 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 31.51 | 30.09 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 30.24 | 29.96 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 31.33 | 29.81 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 30.24 | 29.54 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 24.59 | 26.73 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.22 | 25.74 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 22.22 | 25.74 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.04 | 25.53 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:5.8.1.2 | GO:A0A078JE47 | UniProt:A0A078JE47 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlants:CDY62938 | ProteinID:CDY62938 | ProteinID:CDY62938.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00037777001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF50 | SMART:SM00239 |
| InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EF3E08 | SEG:seg |
Description
BnaA08g31160DBnaA08g31160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE47]
Coordinates
chrLK034221:-:6978..9764
Molecular Weight (calculated)
61856.3 Da
IEP (calculated)
5.588
GRAVY (calculated)
-0.165
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIISTILGT IGFGFGTTIG ILIGYYLFIY HQSTDVQASS NLLLNSLDPE IKPLMELDSE AIAKMFPEIP LWVKNPDFDR IDWLNKLIGY MWPYLDKAIS
101: NMAKSIAKPI IAEQIPNYKI DSVEFEMLTL GSLPPTFQGM KVYATDDKEL IMELSVKWAG NPNILVAAKA FGLKATVQVV DLQVYATPRI TLKPLVPSFP
201: CFANIFVSLM NKPQVDFGLK LLGADVMAIP GLYGFVQELI KDQVANMYLW PKTLCVQIMD PSTAMKKPVG LLNVNVVKAI KLKKKDFLGG SDPYVKLTLS
301: GDRVPGKKTV VKHSNLNPEW NEEFDLVVKD PENQILHLIV YDWEQVGKHD KIGMNVIPLK DLTPEEPKLI TLELLKSMEP NEPVSEKSRG QLVVEVEYKP
401: FKEDNIPDNL DDPNAVEKAP EGTPSGGGLL VVIVHEAEDL EGKYHTNPYV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISTSSRM
501: GLIQSKEALG YVVINLADVV SNRRINDKYH LIDSKNGRVQ IELQWRTSS
101: NMAKSIAKPI IAEQIPNYKI DSVEFEMLTL GSLPPTFQGM KVYATDDKEL IMELSVKWAG NPNILVAAKA FGLKATVQVV DLQVYATPRI TLKPLVPSFP
201: CFANIFVSLM NKPQVDFGLK LLGADVMAIP GLYGFVQELI KDQVANMYLW PKTLCVQIMD PSTAMKKPVG LLNVNVVKAI KLKKKDFLGG SDPYVKLTLS
301: GDRVPGKKTV VKHSNLNPEW NEEFDLVVKD PENQILHLIV YDWEQVGKHD KIGMNVIPLK DLTPEEPKLI TLELLKSMEP NEPVSEKSRG QLVVEVEYKP
401: FKEDNIPDNL DDPNAVEKAP EGTPSGGGLL VVIVHEAEDL EGKYHTNPYV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISTSSRM
501: GLIQSKEALG YVVINLADVV SNRRINDKYH LIDSKNGRVQ IELQWRTSS
001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS
Arabidopsis Description
SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.