Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 96.84 | 96.84 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 96.62 | 96.62 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 99.58 | 93.47 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 98.73 | 92.67 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 95.99 | 89.22 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 79.11 | 73.1 |
| Solyc01g094030.2.1 | Tomato | plastid | 76.16 | 71.49 |
| PGSC0003DMT400035570 | Potato | cytosol | 55.27 | 70.05 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 77.22 | 69.85 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 71.31 | 68.28 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 76.16 | 67.48 |
| KRH40562 | Soybean | endoplasmic reticulum | 75.74 | 67.1 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 76.37 | 66.42 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 68.99 | 65.53 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 65.4 | 65.26 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.24 | 65.15 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 66.67 | 62.2 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 66.67 | 62.2 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 66.67 | 62.2 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 66.46 | 62.01 |
| Os07t0409100-01 | Rice | plasma membrane | 65.82 | 60.58 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 68.57 | 60.52 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 32.7 | 60.31 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 63.71 | 59.92 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 64.14 | 59.49 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 64.14 | 58.57 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 62.87 | 58.55 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 66.03 | 58.5 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 63.5 | 58.45 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 62.87 | 57.86 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 61.6 | 57.03 |
| KRH55269 | Soybean | cytosol, plasma membrane | 31.01 | 56.11 |
| Os03t0251600-00 | Rice | plasma membrane | 61.39 | 55.11 |
| AT3G61030.1 | Thale cress | mitochondrion | 56.12 | 52.26 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 38.4 | 51.56 |
| AT3G60950.1 | Thale cress | mitochondrion | 57.17 | 43.22 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 36.5 | 30.95 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 35.44 | 30.32 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 36.71 | 30.26 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 36.29 | 30.18 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 35.44 | 29.89 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 36.08 | 29.64 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 27.64 | 23.95 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 27.22 | 23.71 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 25.32 | 22.3 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 25.74 | 22.22 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 25.74 | 22.22 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 25.53 | 21.92 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 24.47 | 21.44 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 24.26 | 21.26 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | GO:A0A078BY30 | InterPro:C2_dom | InterPro:C2_domain_sf | EnsemblPlants:CDX67848 |
| ProteinID:CDX67848 | ProteinID:CDX67848.1 | InterPro:CLB_plant | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00099046001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 |
| PFAM:PF00168 | PFAM:PF17047 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 |
| SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EE8E4F |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g18880D
Coordinates
chrLK031787:+:2529361..2532957
Molecular Weight (calculated)
51187.7 Da
IEP (calculated)
5.876
GRAVY (calculated)
0.046
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISGILFG IIFGVAIMAG WARMMTHRSS KRVAKAVDMK LLGSLSREDL IKICGDNFPQ WISFPAFEQV KWLNKLLGKM WPFIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVQDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIYKTK AIENNLNPVW DQTFELIAED KETQSLTIEV
301: FDKDVGQDER LGLVKLPLSS LEVGVTKEME LNLLSSLDTL KVKDKKDRGS ITLKVHYHEF NKEEQMAALE EEKKIMEERK RLKEAGMIGS TMDAVGSGLG
401: AGVGMVGTGI GAGVGLVGTG VTSGVGMVGS GFGAMGSGLS KAGRFMGRTI TGQSSKRSGS STPVNSETDG SKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVQDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIYKTK AIENNLNPVW DQTFELIAED KETQSLTIEV
301: FDKDVGQDER LGLVKLPLSS LEVGVTKEME LNLLSSLDTL KVKDKKDRGS ITLKVHYHEF NKEEQMAALE EEKKIMEERK RLKEAGMIGS TMDAVGSGLG
401: AGVGMVGTGI GAGVGLVGTG VTSGVGMVGS GFGAMGSGLS KAGRFMGRTI TGQSSKRSGS STPVNSETDG SKQQ
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.