Factsheet for Bra003434.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	93.47	99.58
Bra014457.1-P	Field mustard	endoplasmic reticulum, extracellular	96.63	96.63
AT3G61050.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	95.64	94.71
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	78.22	77.0
Solyc01g094030.2.1	Tomato	plastid	75.84	75.84
PGSC0003DMT400035570	Potato	cytosol	56.04	75.67
KRH48321	Soybean	endoplasmic reticulum, mitochondrion	76.83	74.05
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	70.89	72.32
KRH65210	Soybean	endoplasmic reticulum, mitochondrion	75.84	71.59
KRH40562	Soybean	endoplasmic reticulum	75.25	71.03
KRH00619	Soybean	mitochondrion, plasma membrane	75.64	70.09
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	68.91	69.74
Solyc10g017590.2.1	Tomato	mitochondrion	65.54	69.68
PGSC0003DMT400026606	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.34	69.5
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	34.46	67.7
TraesCS2B01G262400.1	Wheat	plasma membrane	67.33	66.93
TraesCS2A01G244800.1	Wheat	plasma membrane	67.33	66.93
TraesCS2D01G242600.1	Wheat	plasma membrane	67.13	66.73
EER96263	Sorghum	mitochondrion, plasma membrane	66.73	66.34
Os07t0409100-01	Rice	plasma membrane	66.34	65.05
EER93061	Sorghum	endoplasmic reticulum, mitochondrion	64.16	64.29
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	68.32	64.25
EER92549	Sorghum	endoplasmic reticulum, extracellular	64.75	63.99
KRH55269	Soybean	cytosol, plasma membrane	33.07	63.74
Zm00001d028437_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	64.75	63.01
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	63.17	62.67
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	63.76	62.52
Zm00001d019472_P005	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	66.14	62.43
TraesCS4A01G081200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	63.17	61.94
HORVU4Hr1G062820.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	62.38	61.52
Os03t0251600-00	Rice	plasma membrane	62.18	59.47
HORVU2Hr1G052430.2	Barley	cytosol	40.79	58.36
AT3G61030.1	Thale cress	mitochondrion	52.28	51.87
AT3G60950.1	Thale cress	mitochondrion	53.27	42.9
Bra015431.1-P	Field mustard	endoplasmic reticulum, extracellular	37.43	33.81
Bra023307.1-P	Field mustard	endoplasmic reticulum	36.44	32.74
Bra030612.1-P	Field mustard	endoplasmic reticulum, extracellular	36.83	29.15
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	28.12	26.1
Bra016478.1-P	Field mustard	endoplasmic reticulum, extracellular	23.56	23.38
Bra031157.1-P	Field mustard	endoplasmic reticulum, extracellular	24.95	23.29
Bra012209.1-P	Field mustard	cytosol	17.23	22.54

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra003434	EnsemblPlants:Bra003434.1	EnsemblPlants:Bra003434.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:CLB_plant	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0006139	GO:GO:0006355	GO:GO:0006810	GO:GO:0006869	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	UniProt:M4CGV1	PFAM:PF00168	PFAM:PF17047
PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF51	SMART:SM00239	InterPro:SMP_LBD
SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI00025417FB	SEG:seg	:

Description

AT3G61050 (E=3e-226) NTMC2TYPE4, NTMC2T4 | NTMC2T4; lipid binding

Coordinates

chrA07:+:13166605..13169766

Molecular Weight (calculated)

54683.1 Da

IEP (calculated)

7.618

GRAVY (calculated)

0.029

Length

505 amino acids

Sequence
(BLAST)

001: MGLISGILFG IIFGVAIMAG WARMMTHRTS KRVAKAVDMK LLGSLSREDL IKICGDNFPQ WISFPAFEQV KWLNKLLGKM WPFIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVQDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLMVTVV KATNLKNKEL IGKSDPYATI HIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTIE VFDKDVGQDE RLGLVKLPLS SLEVGVTKEM ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EEEKKIMEER KRLKEAGMIG STMDAVGSGL GAGVGMVGTG IGAGVGLVGT GVTSGVGMVG SGFGAMGSGL SKAGRFMGRT ITGQSSKRSG SSTPVNSETD
501: GSKQQ

Best Arabidopsis Sequence Match ( AT3G61050.1 )
(BLAST)

001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ

Arabidopsis Description

NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.