Factsheet for HORVU4Hr1G062820.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	90.23	90.77
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	91.02	90.49
TraesCS4A01G081200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	90.62	90.1
EER92549	Sorghum	endoplasmic reticulum, extracellular	81.45	81.6
Zm00001d028437_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	82.42	81.31
Os03t0251600-00	Rice	plasma membrane	77.54	75.19
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	64.84	66.53
KRH48321	Soybean	endoplasmic reticulum, mitochondrion	65.23	63.74
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	63.67	63.55
Bra014457.1-P	Field mustard	endoplasmic reticulum, extracellular	61.72	62.57
Bra003434.1-P	Field mustard	endoplasmic reticulum, extracellular	61.52	62.38
CDY45675	Canola	endoplasmic reticulum, extracellular	61.33	62.18
CDY42483	Canola	endoplasmic reticulum, extracellular	57.42	62.03
KRH65210	Soybean	endoplasmic reticulum, mitochondrion	64.65	61.87
CDX89094	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.23	61.81
AT3G61050.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	61.52	61.76
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	57.03	61.6
KRH40562	Soybean	endoplasmic reticulum	63.87	61.12
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	63.67	60.71
KRH00619	Soybean	mitochondrion, plasma membrane	64.26	60.37
Solyc10g017590.2.1	Tomato	mitochondrion	55.66	60.0
Solyc01g094030.2.1	Tomato	plastid	58.79	59.6
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	57.62	59.6
PGSC0003DMT400026606	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	55.86	59.34
PGSC0003DMT400035570	Potato	cytosol	42.19	57.75
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	26.76	53.31
HORVU2Hr1G052430.2	Barley	cytosol	36.33	52.69
KRH55269	Soybean	cytosol, plasma membrane	25.39	49.62
AT3G61030.1	Thale cress	mitochondrion	36.33	36.54
HORVU6Hr1G017900.14	Barley	endoplasmic reticulum, extracellular, plasma membrane	35.16	30.77
AT3G60950.1	Thale cress	mitochondrion	36.52	29.82
HORVU2Hr1G114590.1	Barley	endoplasmic reticulum, extracellular, plastid	32.23	28.95
HORVU7Hr1G101310.22	Barley	extracellular, golgi	25.78	24.49
HORVU5Hr1G084010.1	Barley	endoplasmic reticulum, extracellular	25.2	23.93
HORVU5Hr1G084020.3	Barley	cytosol	4.49	10.55

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	UniProt:A0A287PBU0	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008289
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU4Hr1G062820	EnsemblPlants:HORVU4Hr1G062820.2	InterPro:IPR000008	InterPro:IPR031468
InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360	PFscan:PS50004	PFscan:PS51847
PANTHER:PTHR10774	PANTHER:PTHR10774:SF166	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP
TMHMM:TMhelix	UniParc:UPI000B47C5EF	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:A0A287PBU0]

Coordinates

chrchr4H:-:525531030..525535437

Molecular Weight (calculated)

55546.6 Da

IEP (calculated)

6.899

GRAVY (calculated)

0.078

Length

512 amino acids

Sequence
(BLAST)

001: MGFISGIMMG FIVGVALIAG WAHAMSRRAH KRSAKAAEIS ALGSLNREDL RKICGENLPQ WISFPFVLQV KWLNRQLSKL WPFVEEAATM VIRDSVEPIL
101: DVYRPVGISS LKFSRLSLGT VPPKIEGIRV QSFQKGQITM DIDFKWGGDP NIILAVETLV ASLPIQFKNL QVFTIIRVVF QLSDEIPCIS AVVIALLAEP
201: KPRIDYILKA VGGSLTAMPG LSDMIDDTVA SLITDMLQWP HRIVVPLGGV DVDISDLELK PNGKVTVTVV RAESLKNKEL IGKSDPYVVL FIRPMFKEKT
301: RVIDDNLNPE WNETFELIAE DKETQHIILE VFDEDSLKQD KRLGIAKVPL SDLEVETVQE INVQLLSSLD TTKVKDKKDR GVLTIRVFYH PYTKEEALRA
401: LELEKRTVEE RMKTREGTGA VSGAADAASG VASTVTNVAG TGVAAGAAAA GSGVHMAGSG VHMAGSGVAM VGTGIDAFGK SISKASKSIS KAVTGPFSSQ
501: RRSAASVPTV DE

Best Arabidopsis Sequence Match ( AT3G61050.1 )
(BLAST)

001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ

Arabidopsis Description

NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.