CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67848	Canola	endoplasmic reticulum, extracellular, plasma membrane	92.67	98.73
CDX89094	Canola	endoplasmic reticulum, extracellular, plasma membrane	89.7	95.57
CDY42483	Canola	endoplasmic reticulum, extracellular	89.5	95.36
AT3G61050.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	94.85	93.92
VIT_15s0048g01410.t01	Wine grape	endoplasmic reticulum, extracellular	78.02	76.8
PGSC0003DMT400035570	Potato	cytosol	56.04	75.67
Solyc01g094030.2.1	Tomato	plastid	75.45	75.45
KRH48321	Soybean	endoplasmic reticulum, mitochondrion	76.83	74.05
Solyc05g047710.2.1	Tomato	endoplasmic reticulum, mitochondrion	71.09	72.53
KRH65210	Soybean	endoplasmic reticulum, mitochondrion	75.84	71.59
KRH40562	Soybean	endoplasmic reticulum	75.05	70.84
KRH00619	Soybean	mitochondrion, plasma membrane	75.45	69.91
Solyc10g017590.2.1	Tomato	mitochondrion	65.54	69.68
GSMUA_Achr2P12230_001	Banana	endoplasmic reticulum, mitochondrion	68.71	69.54
PGSC0003DMT400026606	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.14	69.29
Solyc10g052520.1.1	Tomato	endoplasmic reticulum, extracellular	34.46	67.7
TraesCS2A01G244800.1	Wheat	plasma membrane	67.33	66.93
TraesCS2B01G262400.1	Wheat	plasma membrane	67.33	66.93
TraesCS2D01G242600.1	Wheat	plasma membrane	67.13	66.73
EER96263	Sorghum	mitochondrion, plasma membrane	66.73	66.34
Os07t0409100-01	Rice	plasma membrane	66.53	65.24
GSMUA_Achr5P04070_001	Banana	endoplasmic reticulum, mitochondrion	68.51	64.43
EER93061	Sorghum	endoplasmic reticulum, mitochondrion	63.96	64.09
EER92549	Sorghum	endoplasmic reticulum, extracellular	64.55	63.8
KRH55269	Soybean	cytosol, plasma membrane	33.07	63.74
Zm00001d028437_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	64.55	62.81
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	62.97	62.48
TraesCS4D01G223100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	63.56	62.33
Zm00001d019472_P005	Maize	endoplasmic reticulum, mitochondrion, plasma membrane	65.74	62.06
TraesCS4A01G081200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	62.97	61.75
HORVU4Hr1G062820.2	Barley	endoplasmic reticulum, extracellular, plasma membrane	62.18	61.33
Os03t0251600-00	Rice	plasma membrane	61.78	59.09
HORVU2Hr1G052430.2	Barley	cytosol	40.59	58.07
AT3G61030.1	Thale cress	mitochondrion	51.88	51.47
AT3G60950.1	Thale cress	mitochondrion	52.87	42.58
CDY47278	Canola	endoplasmic reticulum, extracellular	37.23	33.63
CDX85729	Canola	endoplasmic reticulum, extracellular, plastid	36.63	33.39
CDY15543	Canola	endoplasmic reticulum, extracellular	37.23	32.98
CDY51108	Canola	endoplasmic reticulum, extracellular, plastid	36.63	32.92
CDY10116	Canola	endoplasmic reticulum, extracellular	37.43	32.87
CDX86575	Canola	endoplasmic reticulum, extracellular	37.03	32.41
CDX70250	Canola	endoplasmic reticulum, extracellular	27.92	25.78
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.52	25.55
CDY43415	Canola	endoplasmic reticulum, extracellular	26.34	24.72
CDY62938	Canola	endoplasmic reticulum, extracellular	26.73	24.59
CDY54339	Canola	endoplasmic reticulum, extracellular	26.53	24.41
CDY57593	Canola	endoplasmic reticulum, extracellular	26.34	24.09
CDX81995	Canola	endoplasmic reticulum, extracellular	24.95	23.29
CDY13846	Canola	endoplasmic reticulum, extracellular	24.75	23.11

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078I4B7	UniProt:A0A078I4B7	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlants:CDY45675	ProteinID:CDY45675	ProteinID:CDY45675.1	InterPro:CLB_plant	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006139	GO:GO:0006355	GO:GO:0006810
GO:GO:0006869	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00082457001	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047
PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF51	SMART:SM00239	InterPro:SMP_LBD
SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI0004EE590E	SEG:seg	:

Description

BnaCnng13400DBnaCnng13400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4B7]

Coordinates

chrLK032633:+:9544..13072

Molecular Weight (calculated)

54666.0 Da

IEP (calculated)

7.618

GRAVY (calculated)

0.033

Length

505 amino acids

Sequence
(BLAST)

001: MGLISGILFG IVFGVAIMAG WARMMTHRTS KRVAKAVDMK LLGSLSREDL IKICGDNFPQ WISFPAFEQV KWLNKLLGKM WPFIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVQDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI HIRPVFKYKT
301: KTIENNLSPV WDQTFELIAE DKETQSLTIE VFDKDVGQDE RLGLVKLPLS SLEVGVTKEM ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EEEKKIMEER KRLKEAGMIG STMDAVGSGL GTGVGLVGTG IGAGVGLVGT GVTSGVGMVG SGFGAMGSGL SKAGRFMGRT ITGQSSKRSG SSTPVNSETD
501: GSKQQ

Best Arabidopsis Sequence Match ( AT3G61050.1 )
(BLAST)

001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ

Arabidopsis Description

NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.