Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 96.52 | 99.28 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 93.91 | 94.74 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 94.09 | 93.76 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 90.61 | 93.04 |
| PGSC0003DMT400054286 | Potato | extracellular | 9.91 | 81.43 |
| PGSC0003DMT400068835 | Potato | extracellular | 9.91 | 81.43 |
| PGSC0003DMT400046490 | Potato | cytosol | 11.65 | 79.76 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 34.26 | 76.36 |
| PGSC0003DMT400020478 | Potato | cytosol | 55.65 | 75.12 |
| Solyc07g007680.2.1 | Tomato | plastid | 72.87 | 74.56 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 73.04 | 74.07 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 72.17 | 73.45 |
| KRH03623 | Soybean | endoplasmic reticulum | 75.65 | 73.23 |
| PGSC0003DMT400078832 | Potato | cytosol | 33.57 | 72.83 |
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 69.57 | 71.56 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 68.35 | 70.94 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 71.13 | 70.15 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 68.35 | 69.93 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 68.17 | 68.77 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 68.0 | 68.6 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 68.7 | 68.58 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 67.65 | 68.25 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 67.65 | 68.25 |
| EES11541 | Sorghum | extracellular, golgi | 68.35 | 68.23 |
| PGSC0003DMT400041534 | Potato | cytosol | 16.7 | 66.21 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 66.61 | 64.15 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 31.48 | 59.15 |
| Solyc12g009760.1.1 | Tomato | extracellular | 12.52 | 58.06 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 32.87 | 37.43 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 30.26 | 36.71 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.26 | 36.71 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.26 | 36.71 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.26 | 31.99 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 30.09 | 31.63 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 30.09 | 31.51 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 29.57 | 31.42 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 29.39 | 31.24 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 29.22 | 31.23 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 29.74 | 31.15 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 28.7 | 29.89 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | GO:A0A078F9S9 | UniProt:A0A078F9S9 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlants:CDY10116 | ProteinID:CDY10116 | ProteinID:CDY10116.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00031921001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 |
| InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EE8D84 | SEG:seg |
Description
BnaC05g03590DBnaC05g03590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9S9]
Coordinates
chrLK032001:+:101774..105873
Molecular Weight (calculated)
64726.5 Da
IEP (calculated)
5.611
GRAVY (calculated)
-0.003
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFIVGLVVG LIVGITIIIG FVKAENYRSK LRSELANTVA AFARMTVEDS RKLLPAEFYP SWVVFSERQK LSFLNFIFFR KSFFLFLTWL NHHLTKIWPY
101: VDEAASELIK ASVEPVLEQY RPAIVASLTF SKLTLGTVAP QFTGVSIVEG DKNGMTMELD MNWDGNPNIV LGIKTLVGVS LPVQVKNIGF TGVFRLIFRP
201: LVDEFPCFGA VSVSLREKKK LDFTLKVVGG DISAIPGLSD AIEETIRDAV EDSITWPVRK VIPILPGDYS DLELKPVGML EVKLVQAKNL TNKDLVGKSD
301: PFAKMFIRPL REKTQRSKTI NNDLNPIWNE HFEFVVEDAS TQHLVVRVYD DEGVQASELL GCAQIRLCEL EPGKVKDVWL KLVKDLEIQR DNKNRGEVHL
401: ELLYVPFGAG NGVNPFTSSS MTSLEKVLKN DTAEEVNASS RKRKDVIVRG VLSVTVISAE EIPIQDLMGK ADPFVVLSMK KSGAKSKTRV VNDSLNPVWN
501: QTFDFVVEDG LHDMLVLEVW DHDTFGKDYI GRCILTLTRV IMEEEYTDWF ELDESKAGKL QLHLKWLAQS IYRDS
101: VDEAASELIK ASVEPVLEQY RPAIVASLTF SKLTLGTVAP QFTGVSIVEG DKNGMTMELD MNWDGNPNIV LGIKTLVGVS LPVQVKNIGF TGVFRLIFRP
201: LVDEFPCFGA VSVSLREKKK LDFTLKVVGG DISAIPGLSD AIEETIRDAV EDSITWPVRK VIPILPGDYS DLELKPVGML EVKLVQAKNL TNKDLVGKSD
301: PFAKMFIRPL REKTQRSKTI NNDLNPIWNE HFEFVVEDAS TQHLVVRVYD DEGVQASELL GCAQIRLCEL EPGKVKDVWL KLVKDLEIQR DNKNRGEVHL
401: ELLYVPFGAG NGVNPFTSSS MTSLEKVLKN DTAEEVNASS RKRKDVIVRG VLSVTVISAE EIPIQDLMGK ADPFVVLSMK KSGAKSKTRV VNDSLNPVWN
501: QTFDFVVEDG LHDMLVLEVW DHDTFGKDYI GRCILTLTRV IMEEEYTDWF ELDESKAGKL QLHLKWLAQS IYRDS
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.