Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 98.95 | 98.95 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 98.77 | 98.77 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 97.37 | 97.37 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 86.14 | 85.24 |
| EES11541 | Sorghum | extracellular, golgi | 85.44 | 84.55 |
| PGSC0003DMT400068835 | Potato | extracellular | 9.3 | 75.71 |
| PGSC0003DMT400054286 | Potato | extracellular | 9.3 | 75.71 |
| PGSC0003DMT400046490 | Potato | cytosol | 11.05 | 75.0 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 70.35 | 71.61 |
| Bra015431.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.12 | 70.48 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 69.12 | 70.48 |
| PGSC0003DMT400020478 | Potato | cytosol | 52.63 | 70.42 |
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 68.95 | 70.3 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 70.0 | 70.0 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 71.58 | 69.98 |
| Solyc07g007680.2.1 | Tomato | plastid | 68.77 | 69.75 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 68.42 | 69.03 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 31.23 | 68.99 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 69.47 | 68.63 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.89 | 68.25 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 68.77 | 68.17 |
| KRH03623 | Soybean | endoplasmic reticulum | 70.7 | 67.85 |
| PGSC0003DMT400041534 | Potato | cytosol | 17.19 | 67.59 |
| PGSC0003DMT400078832 | Potato | cytosol | 31.4 | 67.55 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 67.54 | 67.54 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 67.02 | 66.55 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 64.04 | 65.88 |
| PGSC0003DMT400036226 | Potato | endoplasmic reticulum | 63.33 | 65.4 |
| Bra023307.1-P | Field mustard | endoplasmic reticulum | 64.21 | 65.12 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 67.89 | 64.82 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 63.51 | 64.41 |
| Bra030612.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.47 | 62.07 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 30.7 | 61.4 |
| Solyc12g009760.1.1 | Tomato | extracellular | 12.11 | 55.65 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 29.3 | 54.58 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 32.11 | 36.02 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 29.47 | 33.01 |
| TraesCS5B01G330500.1 | Wheat | cytosol | 15.09 | 29.25 |
| TraesCS5B01G330600.1 | Wheat | endoplasmic reticulum | 27.37 | 28.21 |
| TraesCS7B01G347000.3 | Wheat | extracellular, golgi | 26.67 | 26.34 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 |
| GO:GO:0008289 | GO:GO:0009506 | GO:GO:0012505 | GO:GO:0016020 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP |
| EnsemblPlantsGene:TraesCS2B01G545700 | EnsemblPlants:TraesCS2B01G545700.3 | TIGR:cd00030 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:-:742524307..742528873
Molecular Weight (calculated)
64057.6 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.195
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFWMGLAMG VAAGVALIVA FARCENSRGA RRRKLAATVA TFSKMTVEDS RKLLPGSLYP SWVVFSTQQK LKWLNEELNK IWPFVNEAAS ELIKASVEPV
101: LEQYRPVVFA ALTFSKLTLG TVAPQFTGIS IIESNEEGIV MELEMNWDAN PSIILDVKTR LGVGLPIQVK DIGFTGVFRL IFKPLVEQLP CFGAVCFSLR
201: QKKKLDFKLK VIGGDISAIP GISAALEETI KNAIEDSITW PVRKVIPIVP GDYSDLELKP VGTLEVKLVQ ARDLTNKDLI GKSDPFATLY IRPLPDKTKR
301: SKTINNDLNP IWNEHFEFIV EDADTQSVTV KIYDDDGIQE SDLIGCAQVS LKDLQPGKVK DVWLKLVKDL EIQRDRKDRG QVHLELVYYP YNMKDETPNP
401: FKQHFSMTSL ERTMTSNGNG SASKDYGRLS SRKRKEVILR GVLQVTVISG EDLPAMDMNG KSDPYVVVSL KKTKTKHKTR VVNESLNPVW NQTFDFVVED
501: GLHDMLMLEV YDHDTFSRDY MGRCILTLTK VLIEEEYTDS FPLQGAKTGK LKLHLKWSPQ SIMRDSGEAA
101: LEQYRPVVFA ALTFSKLTLG TVAPQFTGIS IIESNEEGIV MELEMNWDAN PSIILDVKTR LGVGLPIQVK DIGFTGVFRL IFKPLVEQLP CFGAVCFSLR
201: QKKKLDFKLK VIGGDISAIP GISAALEETI KNAIEDSITW PVRKVIPIVP GDYSDLELKP VGTLEVKLVQ ARDLTNKDLI GKSDPFATLY IRPLPDKTKR
301: SKTINNDLNP IWNEHFEFIV EDADTQSVTV KIYDDDGIQE SDLIGCAQVS LKDLQPGKVK DVWLKLVKDL EIQRDRKDRG QVHLELVYYP YNMKDETPNP
401: FKQHFSMTSL ERTMTSNGNG SASKDYGRLS SRKRKEVILR GVLQVTVISG EDLPAMDMNG KSDPYVVVSL KKTKTKHKTR VVNESLNPVW NQTFDFVVED
501: GLHDMLMLEV YDHDTFSRDY MGRCILTLTK VLIEEEYTDS FPLQGAKTGK LKLHLKWSPQ SIMRDSGEAA
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.