Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 68.68 | 73.35 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 70.52 | 72.21 |
| PGSC0003DMT400020478 | Potato | cytosol | 50.75 | 71.13 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.0 | 70.55 |
| PGSC0003DMT400068835 | Potato | extracellular | 8.21 | 70.0 |
| PGSC0003DMT400054286 | Potato | extracellular | 8.21 | 70.0 |
| EES11541 | Sorghum | extracellular, golgi | 67.34 | 69.79 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 66.33 | 69.47 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 66.83 | 69.27 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 65.49 | 69.2 |
| Solyc07g007680.2.1 | Tomato | plastid | 64.99 | 69.04 |
| PGSC0003DMT400078832 | Potato | cytosol | 30.49 | 68.68 |
| Bra015431.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.15 | 68.52 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 64.15 | 68.52 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 65.16 | 68.25 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 63.99 | 68.21 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 64.82 | 67.89 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 64.49 | 67.54 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 64.49 | 67.54 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 64.32 | 67.37 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 64.82 | 67.07 |
| PGSC0003DMT400041534 | Potato | cytosol | 16.25 | 66.9 |
| PGSC0003DMT400046490 | Potato | cytosol | 9.38 | 66.67 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 64.15 | 66.61 |
| KRH03623 | Soybean | endoplasmic reticulum | 65.83 | 66.16 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 63.48 | 66.03 |
| PGSC0003DMT400036226 | Potato | endoplasmic reticulum | 60.97 | 65.94 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 60.8 | 65.52 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 27.97 | 64.73 |
| Bra023307.1-P | Field mustard | endoplasmic reticulum | 60.8 | 64.59 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 60.64 | 64.41 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 29.48 | 61.75 |
| Bra030612.1-P | Field mustard | endoplasmic reticulum, extracellular | 65.49 | 61.29 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 27.97 | 54.58 |
| Solyc12g009760.1.1 | Tomato | extracellular | 11.22 | 54.03 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 28.98 | 34.67 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 27.81 | 30.91 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 26.63 | 29.89 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 26.13 | 29.0 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 25.96 | 28.81 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 23.95 | 26.93 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 21.11 | 26.75 |
| GSMUA_Achr4P18210_001 | Banana | extracellular, plasma membrane | 5.53 | 23.24 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr3G19840_001 | EnsemblPlants:GSMUA_Achr3P19840_001 | EnsemblPlants:GSMUA_Achr3T19840_001 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | UniProt:M0SG50 | PFAM:PF00168 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | TMHMM:TMhelix |
| UniParc:UPI0002955AE1 | SEG:seg | : | : | : | : |
Description
Putative Extended synaptotagmin-3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G19840_001]
Coordinates
chr3:+:21126762..21133603
Molecular Weight (calculated)
67846.6 Da
IEP (calculated)
8.520
GRAVY (calculated)
-0.056
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFFLGIVLG IAFGLGLVIS FARSETSRSK RRRELAASVA SFSKMSFQDS RKIFPAAFYP SWVIFSHRQK VIKLCFLKWL NHELIKIWPY VNEAASEIIR
101: TSIEPVLEQY KSAILSSFKF SKLNLGTVAP QFTDITLHQT SKKLTTLTDT YMIMSFFVGV TIIEDDGCGI TMELDLNWDG NPNIVLDIRT KLGVVLPVQV
201: KDISFTGVFR VIFKPLTEHF PCFGAVSYSL RDKKKLDFTL KVIGGEISTI PGISDAIEET IHDAIEDSIS WPVRKVVPIL PGDYSDLELR PVGILEVKLV
301: QARNLTNKDI IGKSDPFAVL YIRPIRARMK ISKVISNDLN PIWNEHFEFV VEDVPTQNLV VKIYDDDGVR PPELIGCARV RLKDLQPGKV EDIWLKLVKD
401: LEVQRDKKDR GQVHLELLYC PYDMEDEIVN PFAHQFSMTS LEKALKSGKS RTKASHIHRT PTNRKRDVIL RGVLSVTVIS ANNLPAMDMS GKSDPYVVLS
501: MKKMSTINNK TRVVNESLNP IWDQTFDFVV EDGLHDMLIL EVWDHDTFGK DYIGRCILTL TKVIVEKEYS DSFPLEGAKS GRLNLHFKWT PLPIYRA
101: TSIEPVLEQY KSAILSSFKF SKLNLGTVAP QFTDITLHQT SKKLTTLTDT YMIMSFFVGV TIIEDDGCGI TMELDLNWDG NPNIVLDIRT KLGVVLPVQV
201: KDISFTGVFR VIFKPLTEHF PCFGAVSYSL RDKKKLDFTL KVIGGEISTI PGISDAIEET IHDAIEDSIS WPVRKVVPIL PGDYSDLELR PVGILEVKLV
301: QARNLTNKDI IGKSDPFAVL YIRPIRARMK ISKVISNDLN PIWNEHFEFV VEDVPTQNLV VKIYDDDGVR PPELIGCARV RLKDLQPGKV EDIWLKLVKD
401: LEVQRDKKDR GQVHLELLYC PYDMEDEIVN PFAHQFSMTS LEKALKSGKS RTKASHIHRT PTNRKRDVIL RGVLSVTVIS ANNLPAMDMS GKSDPYVVLS
501: MKKMSTINNK TRVVNESLNP IWDQTFDFVV EDGLHDMLIL EVWDHDTFGK DYIGRCILTL TKVIVEKEYS DSFPLEGAKS GRLNLHFKWT PLPIYRA
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.