Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 80.96 | 84.44 |
| PGSC0003DMT400054286 | Potato | extracellular | 9.78 | 81.43 |
| PGSC0003DMT400068835 | Potato | extracellular | 9.78 | 81.43 |
| PGSC0003DMT400078832 | Potato | cytosol | 34.48 | 75.85 |
| PGSC0003DMT400020478 | Potato | cytosol | 55.06 | 75.35 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 72.04 | 74.07 |
| Solyc07g007680.2.1 | Tomato | plastid | 71.36 | 74.02 |
| Bra015431.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.98 | 72.99 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 69.98 | 72.99 |
| PGSC0003DMT400036226 | Potato | endoplasmic reticulum | 68.27 | 72.1 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 69.81 | 72.04 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 70.33 | 71.93 |
| KRH03623 | Soybean | endoplasmic reticulum | 73.24 | 71.89 |
| EES11541 | Sorghum | extracellular, golgi | 71.01 | 71.88 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 68.95 | 71.79 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 69.98 | 71.58 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 69.81 | 71.4 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 70.5 | 71.35 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 69.64 | 71.23 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 70.15 | 71.13 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 69.47 | 71.05 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 69.47 | 71.05 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 70.15 | 70.88 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 67.24 | 70.76 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 72.21 | 70.52 |
| Bra023307.1-P | Field mustard | endoplasmic reticulum | 67.24 | 69.75 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 68.61 | 69.69 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 67.07 | 69.57 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 30.7 | 69.38 |
| PGSC0003DMT400041534 | Potato | cytosol | 16.81 | 67.59 |
| PGSC0003DMT400046490 | Potato | cytosol | 9.61 | 66.67 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 32.42 | 66.32 |
| Bra030612.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.13 | 63.17 |
| Solyc12g009760.1.1 | Tomato | extracellular | 12.86 | 60.48 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 29.16 | 55.56 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 30.02 | 35.07 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 29.5 | 32.03 |
| GSMUA_Achr4P25570_001 | Banana | endoplasmic reticulum, extracellular | 27.96 | 30.3 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 27.44 | 30.08 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 27.1 | 29.37 |
| GSMUA_Achr4P18220_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 23.5 | 29.09 |
| GSMUA_Achr1P26490_001 | Banana | cytosol, mitochondrion | 25.9 | 28.44 |
| GSMUA_Achr4P18210_001 | Banana | extracellular, plasma membrane | 6.35 | 26.06 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr7G05380_001 | EnsemblPlants:GSMUA_Achr7P05380_001 | EnsemblPlants:GSMUA_Achr7T05380_001 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | UniProt:M0TEX8 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 |
| PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 |
| InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0002959977 | SEG:seg | : | : |
Description
Putative Extended synaptotagmin-3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G05380_001]
Coordinates
chr7:-:3979594..3992376
Molecular Weight (calculated)
65449.3 Da
IEP (calculated)
5.623
GRAVY (calculated)
-0.054
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFVGLFLG VVIGVGLVMA FAHSENARSK RRGELAATVA AFSKMTVEDS RKLLPAEFYP SWLNWLNLEL TKIWPYVNEA ASELIRTSVE PVLEQYKSAV
101: LSSLKFSKLT LGTVAPQFTG AIWHKGIFLN LLSVIIEISL YYFSVSLIED DNSGITMELE LQWDGNPNII LDIRTRLGVS LPIQVKNIGF TGVFRLIFKP
201: LVDEFPCFGA VSYSLREKKK LDFTLKVVGG DISSLPGISD AIEGTIRDAI EDSITWPVRK VVPIVPGDYS DLELKPVGIL EVKLVQARDL TNKDIIGKSD
301: PYAVLYIRPL RDRMKTSKTI NNDLNPIWNE HFEFVVEDAS TQNLTIKVYD DEGLQPSELI GCAHVSLKDL QPGKVKDVWL KLVKDLEIQR DKKDRGQVHV
401: ELLFCPFGTE NDFSNPFAVQ KFSMTSLEKA LKGSTNGTDT ANLDRTATQR KKEVIVRGVL SVTVISAEDL PAMDLMGKAD PFVVVRMKKA ETKNKTRVVN
501: ESLNPTWNQT FDFVVEDGLH DMLMLEVYDH DTFGKDYMGR CIMTLTRVIM EGEVRDSFPL EGAKSGKINL YLKWAAQPIF RDT
101: LSSLKFSKLT LGTVAPQFTG AIWHKGIFLN LLSVIIEISL YYFSVSLIED DNSGITMELE LQWDGNPNII LDIRTRLGVS LPIQVKNIGF TGVFRLIFKP
201: LVDEFPCFGA VSYSLREKKK LDFTLKVVGG DISSLPGISD AIEGTIRDAI EDSITWPVRK VVPIVPGDYS DLELKPVGIL EVKLVQARDL TNKDIIGKSD
301: PYAVLYIRPL RDRMKTSKTI NNDLNPIWNE HFEFVVEDAS TQNLTIKVYD DEGLQPSELI GCAHVSLKDL QPGKVKDVWL KLVKDLEIQR DKKDRGQVHV
401: ELLFCPFGTE NDFSNPFAVQ KFSMTSLEKA LKGSTNGTDT ANLDRTATQR KKEVIVRGVL SVTVISAEDL PAMDLMGKAD PFVVVRMKKA ETKNKTRVVN
501: ESLNPTWNQT FDFVVEDGLH DMLMLEVYDH DTFGKDYMGR CIMTLTRVIM EGEVRDSFPL EGAKSGKINL YLKWAAQPIF RDT
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.