Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 98.42 | 97.23 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 94.91 | 96.78 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 94.74 | 93.91 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 92.11 | 93.75 |
| Bra030612.1-P | Field mustard | endoplasmic reticulum, extracellular | 98.25 | 87.77 |
| PGSC0003DMT400068835 | Potato | extracellular | 10.0 | 81.43 |
| PGSC0003DMT400054286 | Potato | extracellular | 10.0 | 81.43 |
| PGSC0003DMT400046490 | Potato | cytosol | 11.4 | 77.38 |
| PGSC0003DMT400020478 | Potato | cytosol | 57.02 | 76.29 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 34.39 | 75.97 |
| Solyc07g007680.2.1 | Tomato | plastid | 74.04 | 75.09 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 74.21 | 74.6 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 73.68 | 74.34 |
| PGSC0003DMT400078832 | Potato | cytosol | 34.21 | 73.58 |
| KRH03623 | Soybean | endoplasmic reticulum | 75.61 | 72.56 |
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 70.35 | 71.74 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 69.65 | 71.66 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 70.0 | 71.0 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 70.0 | 70.0 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 71.4 | 69.81 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 69.47 | 69.47 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 69.47 | 69.47 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 69.47 | 69.47 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 70.18 | 69.44 |
| EES11541 | Sorghum | extracellular, golgi | 69.82 | 69.1 |
| PGSC0003DMT400041534 | Potato | cytosol | 16.84 | 66.21 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 68.25 | 65.16 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 31.93 | 59.48 |
| Solyc12g009760.1.1 | Tomato | extracellular | 12.46 | 57.26 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 32.98 | 37.23 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 30.18 | 36.29 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.18 | 36.29 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.18 | 36.29 |
| CDY41389 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.35 | 31.8 |
| CDY13846 | Canola | endoplasmic reticulum, extracellular | 30.0 | 31.61 |
| CDX70250 | Canola | endoplasmic reticulum, extracellular | 30.18 | 31.44 |
| CDX81995 | Canola | endoplasmic reticulum, extracellular | 29.82 | 31.42 |
| CDY62938 | Canola | endoplasmic reticulum, extracellular | 30.18 | 31.33 |
| CDY54339 | Canola | endoplasmic reticulum, extracellular | 29.82 | 30.97 |
| CDY43415 | Canola | endoplasmic reticulum, extracellular | 29.12 | 30.86 |
| CDY57593 | Canola | endoplasmic reticulum, extracellular | 28.6 | 29.53 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | GO:A0A078FTD3 | UniProt:A0A078FTD3 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlants:CDY15543 | ProteinID:CDY15543 | ProteinID:CDY15543.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00089718001 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 |
| InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0004EF4211 | SEG:seg |
Description
BnaA08g28270DBnaA08g28270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTD3]
Coordinates
chrLK032055:+:459354..463398
Molecular Weight (calculated)
63884.3 Da
IEP (calculated)
5.239
GRAVY (calculated)
-0.049
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVVGLVIG LAVGITIIIG FVKAENYRSK LRAELANTVA AFARMTVEDS RKLLPAEFYP SWVVFSERQK LIVGFGYNSL TWLNHHLTKI WPYVDEAASE
101: LIRASVEPVL EQYRPAVVAS LTFSKLTLGT VAPQFTGVSI VEGDENGMTM ELDMNWDGNP NIVLGIKTLV GVSLPVQVKN IGFTGVFRLI FRPLVDEFPC
201: FGAVSVSLRE KKKLDFTLKV VGGDISAIPG LSDAIEETIR DAVEDSITWP VRKVIPILPG DYSDLELKPV GMLEVKLVQA KNLTNKDLVG KSDPFAKMFI
301: RPLREKTQRS KTINNDLNPI WNEHFEFVVE DASTQHLVVR IYDDEGVQAS ELIGCAQIRL CELEPGKVKD VWLKLVKDLE IQRDNKNRGE VHLELLYVPF
401: GAGSNGIVNP FASSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DMMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF
501: VVEDGLHDML VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWFALDES KAGKLQLHLK WMPQSIYRDS
101: LIRASVEPVL EQYRPAVVAS LTFSKLTLGT VAPQFTGVSI VEGDENGMTM ELDMNWDGNP NIVLGIKTLV GVSLPVQVKN IGFTGVFRLI FRPLVDEFPC
201: FGAVSVSLRE KKKLDFTLKV VGGDISAIPG LSDAIEETIR DAVEDSITWP VRKVIPILPG DYSDLELKPV GMLEVKLVQA KNLTNKDLVG KSDPFAKMFI
301: RPLREKTQRS KTINNDLNPI WNEHFEFVVE DASTQHLVVR IYDDEGVQAS ELIGCAQIRL CELEPGKVKD VWLKLVKDLE IQRDNKNRGE VHLELLYVPF
401: GAGSNGIVNP FASSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DMMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF
501: VVEDGLHDML VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWFALDES KAGKLQLHLK WMPQSIYRDS
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.