Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11541 | Sorghum | extracellular, golgi | 95.14 | 95.14 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 85.24 | 86.14 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 85.24 | 86.14 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 85.24 | 86.14 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 85.07 | 85.96 |
| PGSC0003DMT400068835 | Potato | extracellular | 9.2 | 75.71 |
| PGSC0003DMT400054286 | Potato | extracellular | 9.2 | 75.71 |
| PGSC0003DMT400046490 | Potato | cytosol | 10.94 | 75.0 |
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 70.49 | 72.63 |
| PGSC0003DMT400020478 | Potato | cytosol | 53.47 | 72.3 |
| VIT_11s0118g00230.t01 | Wine grape | endoplasmic reticulum, extracellular | 70.31 | 71.43 |
| AT1G05500.1 | Thale cress | endoplasmic reticulum, extracellular | 69.27 | 71.25 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 69.62 | 70.97 |
| Bra015431.1-P | Field mustard | endoplasmic reticulum, extracellular | 68.75 | 70.84 |
| CDY47278 | Canola | endoplasmic reticulum, extracellular | 68.75 | 70.84 |
| Solyc07g007680.2.1 | Tomato | plastid | 68.92 | 70.64 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 71.35 | 70.5 |
| KRH03623 | Soybean | endoplasmic reticulum | 72.4 | 70.2 |
| CDY15543 | Canola | endoplasmic reticulum, extracellular | 69.44 | 70.18 |
| PGSC0003DMT400078829 | Potato | extracellular, plasma membrane | 31.08 | 69.38 |
| PGSC0003DMT400078832 | Potato | cytosol | 31.77 | 69.06 |
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 68.23 | 68.95 |
| CDY10116 | Canola | endoplasmic reticulum, extracellular | 68.58 | 68.7 |
| CDX86575 | Canola | endoplasmic reticulum, extracellular | 68.75 | 68.63 |
| PGSC0003DMT400041534 | Potato | cytosol | 16.84 | 66.9 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 69.27 | 66.83 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 64.06 | 66.61 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 66.32 | 66.55 |
| PGSC0003DMT400036226 | Potato | endoplasmic reticulum | 63.19 | 65.94 |
| Bra023307.1-P | Field mustard | endoplasmic reticulum | 64.24 | 65.84 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 63.72 | 65.3 |
| Zm00001d007034_P008 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 65.28 | 64.05 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 31.08 | 62.81 |
| Bra030612.1-P | Field mustard | endoplasmic reticulum, extracellular | 69.1 | 62.38 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 30.21 | 56.86 |
| Solyc12g009760.1.1 | Tomato | extracellular | 11.81 | 54.84 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 32.29 | 34.77 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 30.56 | 33.91 |
| Zm00001d030116_P001 | Maize | cytosol | 16.32 | 31.02 |
| Zm00001d006238_P001 | Maize | plasma membrane | 27.08 | 28.94 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 22.4 | 25.96 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 26.91 | 24.26 |
Protein Annotations
| EntrezGene:103645856 | Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A1D6DWI8 | InterPro:C2_dom | InterPro:C2_domain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008289 |
| GO:GO:0009506 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | ProteinID:ONM13042.1 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 |
| PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 |
| InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0002218CCC | EnsemblPlantsGene:Zm00001d002090 | EnsemblPlants:Zm00001d002090_P001 | EnsemblPlants:Zm00001d002090_T001 |
| SEG:seg | : | : | : | : | : |
Description
Synaptotagmin-5
Coordinates
chr2:-:5807146..5814918
Molecular Weight (calculated)
65135.1 Da
IEP (calculated)
7.821
GRAVY (calculated)
-0.181
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFWVGLVLG VAAGLALIVG FVRCENSRSA RRRQLAATVA SFSRMTIEDS RKLLPADLYP SWVVFSSQQK LKWLNQELTK IWPFVNDAAS ELIKTSVEPV
101: LEQYRPIIIA SLKFSKLTLG TVAPQFTGIS IIENTKESGI VMELEMNWDA NPSIILAVKT RLGVALPIQV KDIGFTGVFR LIFKPLIEEL PCFGAVCFSL
201: RQKKKLDFRL KVIGGEISAV PGISDALEDT IKNAIEDSIT WPVRKVIPII PGDYSDLELK PVGTLEVKLV QARDLTNKDL IGKSDPFAIV YVRPLPDKMK
301: RSKTINNDLN PIWNEHFEFT VEDADTQSVT VKIYDDDGIQ ESELIGCAQV RLKDLQPGKV KDVWLKLVKD LEIQRDRKDR GQVHLELLYC PFDMKDEAPN
401: PFSQHFSMTS LERTLTNMEN GSGGSSFDRL SSRKKREIII RGVLSVTVIS GEDLPAMDMN GKSDPYVILS LKKTKTKYKT RVVTESLNPV WNQTFDFVVE
501: DGLHDMLMLE VYDHDTFRRD YMGRCILTLT KVLLEEEYKE SFNLEGAKSG KLNLHLKWSP QPIMRDSREA GSLRSR
101: LEQYRPIIIA SLKFSKLTLG TVAPQFTGIS IIENTKESGI VMELEMNWDA NPSIILAVKT RLGVALPIQV KDIGFTGVFR LIFKPLIEEL PCFGAVCFSL
201: RQKKKLDFRL KVIGGEISAV PGISDALEDT IKNAIEDSIT WPVRKVIPII PGDYSDLELK PVGTLEVKLV QARDLTNKDL IGKSDPFAIV YVRPLPDKMK
301: RSKTINNDLN PIWNEHFEFT VEDADTQSVT VKIYDDDGIQ ESELIGCAQV RLKDLQPGKV KDVWLKLVKD LEIQRDRKDR GQVHLELLYC PFDMKDEAPN
401: PFSQHFSMTS LERTLTNMEN GSGGSSFDRL SSRKKREIII RGVLSVTVIS GEDLPAMDMN GKSDPYVILS LKKTKTKYKT RVVTESLNPV WNQTFDFVVE
501: DGLHDMLMLE VYDHDTFRRD YMGRCILTLT KVLLEEEYKE SFNLEGAKSG KLNLHLKWSP QPIMRDSREA GSLRSR
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.