Factsheet for Bra015431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47278	Canola	endoplasmic reticulum, extracellular	100.0	100.0
AT1G05500.1	Thale cress	endoplasmic reticulum, extracellular	93.56	93.39
Bra030612.1-P	Field mustard	endoplasmic reticulum, extracellular	95.71	83.86
PGSC0003DMT400068835	Potato	extracellular	10.2	81.43
PGSC0003DMT400054286	Potato	extracellular	10.2	81.43
PGSC0003DMT400046490	Potato	cytosol	11.99	79.76
PGSC0003DMT400078829	Potato	extracellular, plasma membrane	35.24	76.36
PGSC0003DMT400020478	Potato	cytosol	57.42	75.35
Solyc07g007680.2.1	Tomato	plastid	74.96	74.56
VIT_11s0118g00230.t01	Wine grape	endoplasmic reticulum, extracellular	75.13	74.07
Solyc12g009790.1.1	Tomato	endoplasmic reticulum	74.42	73.63
PGSC0003DMT400078832	Potato	cytosol	34.53	72.83
KRH03623	Soybean	endoplasmic reticulum	77.28	72.73
GSMUA_Achr1P26040_001	Banana	endoplasmic reticulum, golgi	71.38	71.38
Bra023307.1-P	Field mustard	endoplasmic reticulum	71.02	70.64
GSMUA_Achr7P05380_001	Banana	endoplasmic reticulum	72.99	69.98
TraesCS2B01G545700.3	Wheat	endoplasmic reticulum, extracellular, plastid	70.48	69.12
Zm00001d002090_P001	Maize	endoplasmic reticulum, extracellular, plastid	70.84	68.75
HORVU2Hr1G114590.1	Barley	endoplasmic reticulum, extracellular, plastid	69.95	68.6
TraesCS2A01G517200.1	Wheat	endoplasmic reticulum, extracellular, plastid	69.95	68.6
TraesCS2D01G518800.1	Wheat	endoplasmic reticulum, extracellular, plastid	69.95	68.6
EES11541	Sorghum	extracellular, golgi	70.48	68.4
PGSC0003DMT400041534	Potato	cytosol	17.35	66.9
GSMUA_Achr3P19840_001	Banana	endoplasmic reticulum, golgi, plastid	68.52	64.15
Solyc12g009700.1.1	Tomato	extracellular, plasma membrane	32.56	59.48
Solyc12g009760.1.1	Tomato	extracellular	12.88	58.06
Bra014457.1-P	Field mustard	endoplasmic reticulum, extracellular	33.99	37.62
Bra003434.1-P	Field mustard	endoplasmic reticulum, extracellular	33.81	37.43
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	31.13	31.99
Bra031157.1-P	Field mustard	endoplasmic reticulum, extracellular	30.41	31.42
Bra012209.1-P	Field mustard	cytosol	21.65	31.35
Bra016478.1-P	Field mustard	endoplasmic reticulum, extracellular	27.91	30.65

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra015431	EnsemblPlants:Bra015431.1	EnsemblPlants:Bra015431.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR031468
InterPro:IPR035892	UniProt:M4DG08	PFAM:PF00168	PFAM:PF17047	PRINTS:PR00360	PFscan:PS50004
PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF167	SMART:SM00239	InterPro:SMP_LBD	SUPFAM:SSF49562
InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	UniParc:UPI00025438EB	SEG:seg	:	:

Description

AT1G05500 (E=1e-288) SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1 | NTMC2T2.1

Coordinates

chrA10:-:1806099..1809816

Molecular Weight (calculated)

62703.0 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.045

Length

559 amino acids

Sequence
(BLAST)

001: MGFIVGLVIG LIVGITIIIG FVKAENYRSK LRSELANTVA AFARMTVEDS RKLLPAEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS IVEGDKNGMT MELDMNWDGN PNIVLGIKTL VGVSLPVQVK NIGFTGVFRL IFRPLVDEFP CFGAVSVSLR
201: EKKKLDFTLK VIGGDISAIP GLSDAIEETI RDAVEDSITW PVRKVIPILP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTQR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RVYDDEGVQA SELLGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDNKNRG EVHLELLYVP FGAGNGVNPF
401: TSSSMTSLEK VLKNDTADEV NASSRKRKDV IVRGVLSVTV ISAEEIPIQD LMGKADPFVV LSMKKSGAKS KTRVVNDSLN PVWNQTFDFV VEDGLHDMLV
501: LEVWDHDTFG KDYIGRCILT LTRVIMEEEY TDWFELDESK AGKLQLHLKW MAQSIYRDS

Best Arabidopsis Sequence Match ( AT1G05500.1 )
(BLAST)

001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS

Arabidopsis Description

SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.