Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g05740.t01 | Wine grape | endoplasmic reticulum | 74.22 | 74.74 |
| CDX85729 | Canola | endoplasmic reticulum, extracellular, plastid | 69.86 | 72.38 |
| Bra023307.1-P | Field mustard | endoplasmic reticulum | 70.03 | 71.53 |
| CDY51108 | Canola | endoplasmic reticulum, extracellular, plastid | 69.51 | 71.0 |
| PGSC0003DMT400036226 | Potato | endoplasmic reticulum | 67.94 | 70.65 |
| GSMUA_Achr7P05380_001 | Banana | endoplasmic reticulum | 69.69 | 68.61 |
| KRH03623 | Soybean | endoplasmic reticulum | 70.91 | 68.52 |
| GSMUA_Achr1P26040_001 | Banana | endoplasmic reticulum, golgi | 66.2 | 67.98 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 33.45 | 67.37 |
| TraesCS2B01G545700.3 | Wheat | endoplasmic reticulum, extracellular, plastid | 66.55 | 67.02 |
| EES11541 | Sorghum | extracellular, golgi | 67.07 | 66.84 |
| HORVU2Hr1G114590.1 | Barley | endoplasmic reticulum, extracellular, plastid | 66.03 | 66.49 |
| TraesCS2A01G517200.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 66.03 | 66.49 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 66.55 | 66.32 |
| TraesCS2D01G518800.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 65.85 | 66.32 |
| GSMUA_Achr3P19840_001 | Banana | endoplasmic reticulum, golgi, plastid | 66.03 | 63.48 |
| KRH40562 | Soybean | endoplasmic reticulum | 32.4 | 34.77 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 31.53 | 34.54 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 32.75 | 34.5 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 31.53 | 33.83 |
| KRH55269 | Soybean | cytosol, plasma membrane | 14.46 | 31.68 |
| KRH24304 | Soybean | endoplasmic reticulum | 28.75 | 30.61 |
| KRH29282 | Soybean | endoplasmic reticulum | 28.57 | 30.43 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 28.22 | 30.11 |
| KRH17448 | Soybean | mitochondrion | 28.05 | 29.93 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 27.7 | 29.66 |
| KRH34856 | Soybean | extracellular | 27.7 | 29.17 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 27.35 | 28.81 |
| KRH15981 | Soybean | extracellular | 6.27 | 23.84 |
| KRG95324 | Soybean | extracellular, plasma membrane | 4.36 | 20.66 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A0R0JHJ4 | EMBL:ACUP02003419 | InterPro:C2_dom | InterPro:C2_domain_sf |
| EnsemblPlantsGene:GLYMA_06G066600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 |
| InterPro:IPR035892 | EnsemblPlants:KRH52409 | ProteinID:KRH52409 | ProteinID:KRH52409.1 | PFAM:PF00168 | PFAM:PF17047 |
| PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF162 | SMART:SM00239 |
| InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0002339FFE | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:5079846..5085080
Molecular Weight (calculated)
64590.4 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.067
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFISGMIVG IAIGIVLIVA FARQGSVRSK RRSDLAKTIA QFARMTVEDS RKILPPKFYP SWVVFTRRQK LSSYIHFLLS WLNSQVEKIW PFVNEAASEL
101: IRTNVEPILE QYRPIILSSL TFSKLTLGTV APQFTGVTIV EENSGPEGVT MDLEMQWDGN PNIVLDIKTR VGVVLPVQVK NIGFTGVFRL IFKPLVDEFP
201: AFGAVCFSLK EKKDLDFTLK VIGGDLSTLP GISDAIEETI RDAIEDSITW PVRKVIPILP GDYSNLELKP VGKLEVKLVQ AKNLTNKDIV GKSDPYAVIF
301: VRPLRDRTKT SKIMNNQLNP VWNEHFEFII EDASTQHLTV RIFDDEGVQA SELIGCAQVS LKDLEPGKVK DVWLKLVKDL EVHRDNKYRG EVHLELLYCP
401: FGVESAIRNP FDPDFSLTTF EKTLKSGTGD AEAEDLIGSR RRNNVIVRGV LSVTVISAED LPAVDLMGKA DPFVVLLLKK TEKKLKTRVV NESLNPVWNQ
501: TFDFVVEDGL HEMLILEVYD HDTFGKEKIG RVILTLTKVI LEGEYNETYP LDGAKSGNIS LHLKWTPQHK FRDP
101: IRTNVEPILE QYRPIILSSL TFSKLTLGTV APQFTGVTIV EENSGPEGVT MDLEMQWDGN PNIVLDIKTR VGVVLPVQVK NIGFTGVFRL IFKPLVDEFP
201: AFGAVCFSLK EKKDLDFTLK VIGGDLSTLP GISDAIEETI RDAIEDSITW PVRKVIPILP GDYSNLELKP VGKLEVKLVQ AKNLTNKDIV GKSDPYAVIF
301: VRPLRDRTKT SKIMNNQLNP VWNEHFEFII EDASTQHLTV RIFDDEGVQA SELIGCAQVS LKDLEPGKVK DVWLKLVKDL EVHRDNKYRG EVHLELLYCP
401: FGVESAIRNP FDPDFSLTTF EKTLKSGTGD AEAEDLIGSR RRNNVIVRGV LSVTVISAED LPAVDLMGKA DPFVVLLLKK TEKKLKTRVV NESLNPVWNQ
501: TFDFVVEDGL HEMLILEVYD HDTFGKEKIG RVILTLTKVI LEGEYNETYP LDGAKSGNIS LHLKWTPQHK FRDP
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.