Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00619 | Soybean | mitochondrion, plasma membrane | 97.76 | 95.96 |
| KRH55269 | Soybean | cytosol, plasma membrane | 43.93 | 89.69 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 83.18 | 84.92 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 84.67 | 84.67 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.5 | 81.87 |
| PGSC0003DMT400035570 | Potato | cytosol | 54.77 | 78.34 |
| Solyc01g094030.2.1 | Tomato | plastid | 73.27 | 77.62 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 67.85 | 76.58 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 67.66 | 76.37 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 71.96 | 76.24 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 72.34 | 75.88 |
| Solyc05g047710.2.1 | Tomato | endoplasmic reticulum, mitochondrion | 70.09 | 75.76 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 67.1 | 75.74 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 71.03 | 75.25 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 70.09 | 75.15 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 70.84 | 75.05 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 65.98 | 74.32 |
| PGSC0003DMT400026606 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.36 | 73.65 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 67.29 | 70.87 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 66.36 | 69.88 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 66.17 | 69.69 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 66.17 | 69.69 |
| Os07t0409100-01 | Rice | plasma membrane | 66.92 | 69.51 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 68.6 | 68.34 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 64.11 | 68.06 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 64.49 | 67.51 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 64.67 | 66.67 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 62.8 | 65.24 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 65.23 | 65.23 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 62.06 | 65.23 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 62.62 | 65.05 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 30.84 | 64.2 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 61.12 | 63.87 |
| Os03t0251600-00 | Rice | plasma membrane | 61.5 | 62.31 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 40.0 | 60.62 |
| AT3G61030.1 | Thale cress | mitochondrion | 41.68 | 43.81 |
| AT3G60950.1 | Thale cress | mitochondrion | 42.99 | 36.68 |
| KRH52409 | Soybean | endoplasmic reticulum, extracellular | 34.77 | 32.4 |
| KRH03623 | Soybean | endoplasmic reticulum | 33.08 | 29.8 |
| KRH15981 | Soybean | extracellular | 7.85 | 27.81 |
| KRG91923 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.36 | 25.87 |
| KRH34856 | Soybean | extracellular | 25.61 | 25.14 |
| KRH24304 | Soybean | endoplasmic reticulum | 24.86 | 24.68 |
| KRH05967 | Soybean | endoplasmic reticulum, extracellular | 24.67 | 24.54 |
| KRH29282 | Soybean | endoplasmic reticulum | 24.67 | 24.49 |
| KRH51399 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.49 | 24.44 |
| KRH17448 | Soybean | mitochondrion | 24.49 | 24.35 |
| KRG95324 | Soybean | extracellular, plasma membrane | 5.05 | 22.31 |
Protein Annotations
| EntrezGene:100785209 | Gene3D:2.60.40.150 | MapMan:35.1 | EMBL:ACUP02006044 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:CLB_plant | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G266600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1L6S3 | InterPro:IPR000008 |
| InterPro:IPR031468 | InterPro:IPR035892 | EnsemblPlants:KRH40562 | ProteinID:KRH40562 | ProteinID:KRH40562.1 | PFAM:PF00168 |
| PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 |
| SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP | TMHMM:TMhelix | UniParc:UPI0002338D3B |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:48433488..48440520
Molecular Weight (calculated)
57617.5 Da
IEP (calculated)
6.066
GRAVY (calculated)
0.087
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFSGIFLG MVLGIALMAA WQRMMTYRSA KRIAKAVDIK LLGSLNRDDL KKICGDNFPE WISFPIYEQV KWLNKQLSKL WPFVADAATL VIRESVEPLL
101: EEYRPTGISS LKFSKLSLGN VAPKIEGIRV QSLNKGQIIM DIDFRWGGDP NIVLAVEALV ASIPIQLKDL QVFTIIRVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTALPG ISDMIDDMVN SIVTDTLQWP HRIVVPLGGI PVDTSELELK PQGTLRVTVI KANDLKNMEM IGKSDPYAVL YIRPLFKVKT
301: KVIDNNLNPV WNEVFDLIAE DKETQSLIVE VFDKDIGQDK RLGIVKLPLN DMEPETEKEF ELRMLSSLDT LKVKDKKDRG TITMKIFYHQ FNKEEQLVAL
401: EAEKNILEER KKLKEEGVIG TTMDALDGAA SAVGSGVGMV GTGVATGAGL VGTGIGAGAG FVGTGIGTGA GFVGSGIGAG VGFVGSGLGA VGSGLSRAGK
501: FMGRTITGQG SSRRSGSNTP VNVEETGGGA KPLQQ
101: EEYRPTGISS LKFSKLSLGN VAPKIEGIRV QSLNKGQIIM DIDFRWGGDP NIVLAVEALV ASIPIQLKDL QVFTIIRVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTALPG ISDMIDDMVN SIVTDTLQWP HRIVVPLGGI PVDTSELELK PQGTLRVTVI KANDLKNMEM IGKSDPYAVL YIRPLFKVKT
301: KVIDNNLNPV WNEVFDLIAE DKETQSLIVE VFDKDIGQDK RLGIVKLPLN DMEPETEKEF ELRMLSSLDT LKVKDKKDRG TITMKIFYHQ FNKEEQLVAL
401: EAEKNILEER KKLKEEGVIG TTMDALDGAA SAVGSGVGMV GTGVATGAGL VGTGIGAGAG FVGTGIGTGA GFVGSGIGAG VGFVGSGLGA VGSGLSRAGK
501: FMGRTITGQG SSRRSGSNTP VNVEETGGGA KPLQQ
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.