Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035570 | Potato | cytosol | 70.91 | 93.85 |
| Solyc01g094030.2.1 | Tomato | plastid | 83.64 | 81.98 |
| Solyc10g017590.2.1 | Tomato | mitochondrion | 74.55 | 77.68 |
| VIT_15s0048g01410.t01 | Wine grape | endoplasmic reticulum, extracellular | 79.19 | 76.41 |
| CDX89094 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 69.09 | 72.15 |
| KRH48321 | Soybean | endoplasmic reticulum, mitochondrion | 76.36 | 72.14 |
| Bra014457.1-P | Field mustard | endoplasmic reticulum, extracellular | 73.54 | 72.08 |
| AT3G61050.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 74.14 | 71.96 |
| Solyc10g052520.1.1 | Tomato | endoplasmic reticulum, extracellular | 37.17 | 71.6 |
| CDY42483 | Canola | endoplasmic reticulum, extracellular | 68.48 | 71.52 |
| CDX67848 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 68.28 | 71.31 |
| CDY45675 | Canola | endoplasmic reticulum, extracellular | 72.53 | 71.09 |
| KRH65210 | Soybean | endoplasmic reticulum, mitochondrion | 76.77 | 71.03 |
| Bra003434.1-P | Field mustard | endoplasmic reticulum, extracellular | 72.32 | 70.89 |
| KRH40562 | Soybean | endoplasmic reticulum | 75.76 | 70.09 |
| KRH00619 | Soybean | mitochondrion, plasma membrane | 75.96 | 68.99 |
| GSMUA_Achr2P12230_001 | Banana | endoplasmic reticulum, mitochondrion | 69.29 | 68.74 |
| TraesCS2B01G262400.1 | Wheat | plasma membrane | 67.27 | 65.55 |
| TraesCS2A01G244800.1 | Wheat | plasma membrane | 67.07 | 65.35 |
| TraesCS2D01G242600.1 | Wheat | plasma membrane | 67.07 | 65.35 |
| KRH55269 | Soybean | cytosol, plasma membrane | 34.55 | 65.27 |
| Os07t0409100-01 | Rice | plasma membrane | 67.68 | 65.05 |
| EER96263 | Sorghum | mitochondrion, plasma membrane | 66.26 | 64.57 |
| EER93061 | Sorghum | endoplasmic reticulum, mitochondrion | 64.44 | 63.29 |
| EER92549 | Sorghum | endoplasmic reticulum, extracellular | 63.03 | 61.06 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 63.43 | 60.5 |
| GSMUA_Achr5P04070_001 | Banana | endoplasmic reticulum, mitochondrion | 65.45 | 60.34 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 64.85 | 60.0 |
| TraesCS4B01G222600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.21 | 59.53 |
| TraesCS4D01G223100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.62 | 59.22 |
| HORVU2Hr1G052430.2 | Barley | cytosol | 41.82 | 58.64 |
| Os03t0251600-00 | Rice | plasma membrane | 62.42 | 58.52 |
| TraesCS4A01G081200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 60.61 | 58.25 |
| HORVU4Hr1G062820.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 59.6 | 57.62 |
| AT3G61030.1 | Thale cress | mitochondrion | 44.04 | 42.83 |
| AT3G60950.1 | Thale cress | mitochondrion | 45.45 | 35.89 |
| Solyc12g009760.1.1 | Tomato | extracellular | 8.69 | 34.68 |
| Solyc08g021940.1.1 | Tomato | extracellular, plasma membrane | 19.6 | 34.04 |
| Solyc07g007680.2.1 | Tomato | plastid | 36.16 | 31.85 |
| Solyc12g009790.1.1 | Tomato | endoplasmic reticulum | 35.76 | 31.33 |
| Solyc12g009700.1.1 | Tomato | extracellular, plasma membrane | 16.77 | 27.12 |
| Solyc09g007860.2.1 | Tomato | endoplasmic reticulum | 26.87 | 24.4 |
| Solyc12g089330.1.1 | Tomato | endoplasmic reticulum, extracellular | 25.66 | 24.19 |
| Solyc01g111520.2.1 | Tomato | nucleus | 26.06 | 23.93 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:CLB_plant | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 | UniProt:K4C103 | PFAM:PF00168 | PFAM:PF17047 |
| PFscan:PS50004 | PFscan:PS51847 | PANTHER:PTHR10774 | PANTHER:PTHR10774:SF51 | SMART:SM00239 | InterPro:SMP_LBD |
| SUPFAM:SSF49562 | EnsemblPlantsGene:Solyc05g047710.2 | EnsemblPlants:Solyc05g047710.2.1 | InterPro:Synaptotagmin_SMP | UniParc:UPI0002766CA9 | SEG:seg |
Description
No Description!
Coordinates
chr5:-:59192779..59200177
Molecular Weight (calculated)
54164.2 Da
IEP (calculated)
9.093
GRAVY (calculated)
-0.089
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMIFGVGLM AAWKYMTSYR STKRSSKAVE VNLMSSLSRD DLKKMCDDKF PEWISFPVYE QVKWLNKQLS KLWPFVAEAA EAIIKESVEP LLEDYRPPGI
101: TSLKFSKLSL GTVSPKIEGI RVQKFKKDQI TMDIDLRWGG DPNIVLGVQA AMVASIPIQL KDLQVYTIVR VIFQLAEEIP CISAVVVALL SEPKPRIDYT
201: LKTVGGSLTA LPGISDMIDD TVNSIVTDML EWPHRIVVPI GVGVDTSDLE LKPQGKLIVT VVRANSLKNH EMIGKSDPYA VVYIRPLFKL KTKTINNNLN
301: PVWDQTFDLI AEDKETQSLI LEVFDKDVGQ DQRMGVTKLP LNELVAESPK EIELRLLPKL DMLRVKDKKD RGTITVKVLY HEFNKEEQLA AVDREKQIVE
401: ERKRLKAEGV IGSTMDALDG AASLVGTGLG AGVGLVGTGL GAGAGMVGSG LGAVGSGLSK AGKFMGKTLT GQSRNKSGSH SRVNSVQENG GAKPL
101: TSLKFSKLSL GTVSPKIEGI RVQKFKKDQI TMDIDLRWGG DPNIVLGVQA AMVASIPIQL KDLQVYTIVR VIFQLAEEIP CISAVVVALL SEPKPRIDYT
201: LKTVGGSLTA LPGISDMIDD TVNSIVTDML EWPHRIVVPI GVGVDTSDLE LKPQGKLIVT VVRANSLKNH EMIGKSDPYA VVYIRPLFKL KTKTINNNLN
301: PVWDQTFDLI AEDKETQSLI LEVFDKDVGQ DQRMGVTKLP LNELVAESPK EIELRLLPKL DMLRVKDKKD RGTITVKVLY HEFNKEEQLA AVDREKQIVE
401: ERKRLKAEGV IGSTMDALDG AASLVGTGLG AGVGLVGTGL GAGAGMVGSG LGAVGSGLSK AGKFMGKTLT GQSRNKSGSH SRVNSVQENG GAKPL
001: MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
101: EDYRPPGITS LKFSKLTLGN VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF QLADEIPCIS AVVVALLAEP
201: KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301: KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL
401: EDEKKIMEER KRLKEAGVIG STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM GRTITGQSSK RSGSSTPVNT
501: VPENDGAKQQ
Arabidopsis Description
NTMC2TYPE4At3g61050 [Source:UniProtKB/TrEMBL;Acc:Q9LEX1]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.