Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36798 | Sorghum | cytosol | 81.77 | 95.81 |
| TraesCS6D01G083600.2 | Wheat | endoplasmic reticulum, extracellular | 85.01 | 88.79 |
| TraesCS6A01G098900.2 | Wheat | endoplasmic reticulum, extracellular | 84.84 | 88.61 |
| HORVU6Hr1G017900.14 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 85.35 | 85.64 |
| Zm00001d002090_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 64.05 | 65.28 |
| Zm00001d028437_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 30.15 | 34.1 |
| Zm00001d019472_P005 | Maize | endoplasmic reticulum, mitochondrion, plasma membrane | 30.83 | 33.83 |
| Zm00001d030116_P001 | Maize | cytosol | 16.01 | 31.02 |
| Zm00001d006238_P001 | Maize | plasma membrane | 26.41 | 28.76 |
| Zm00001d014499_P004 | Maize | endoplasmic reticulum, extracellular | 21.98 | 25.96 |
| Zm00001d022625_P006 | Maize | cytosol, peroxisome, plastid | 26.24 | 24.1 |
Protein Annotations
| EntrezGene:100191632 | Gene3D:2.60.40.150 | MapMan:35.1 | UniProt:A0A1D6F2D7 | InterPro:C2_dom | InterPro:C2_domain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR031468 | InterPro:IPR035892 |
| ProteinID:ONM25609.1 | PFAM:PF00168 | PFAM:PF17047 | PRINTS:PR00360 | PFscan:PS50004 | PFscan:PS51847 |
| PANTHER:PTHR10774 | PANTHER:PTHR10774:SF166 | SMART:SM00239 | InterPro:SMP_LBD | SUPFAM:SSF49562 | InterPro:Synaptotagmin_SMP |
| TMHMM:TMhelix | UniParc:UPI00084268F8 | EnsemblPlantsGene:Zm00001d007034 | EnsemblPlants:Zm00001d007034_P008 | EnsemblPlants:Zm00001d007034_T008 | SEG:seg |
Description
Synaptotagmin-5
Coordinates
chr2:+:220570285..220602488
Molecular Weight (calculated)
66795.9 Da
IEP (calculated)
5.686
GRAVY (calculated)
-0.074
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLFGAFLG LVVGVAVVMA FARFENSRAE QRRELAATAA AFSKLTVQDL RKLIPPEFYP SWVSFTQKQK LKWLNQELTK IWPFVNEAAS ELIKTSVEPI
101: FEQYKSFILA SLHFSKLTLG TVAPQFTGVS ILESDDSAII MELELQWDGN PNIVLDIQTT LGISLPVQVK NIGFTGVLRL IFKPLVSEFP CFGAVCCSLR
201: EKSKVEFTLK VIGGEMTAIP GISDAIEVFL IHHPLYFSMY YFCHVTFIEQ FQGTIRDTIE DTLTWPNRII VPIVPGDYSD LELKPTGVLE VKLVEARDLK
301: NKDLVGKSDP FALIYIRPLH DKTKKSKTIN NDLNPIWNEH YEFVVEDIST QHLTVKIYDD EGLQSSEIIG CARVDLADIQ PGKVKDLWLD LVKDLEIQRD
401: KKPRGQVHLE LLYYPYAKHE GVPNPFANQI QLTSLEKVLK TESNGYDINQ RKNVIMRGVL SVTVISAEEL PPMDIGGKAD PFVVLYLKKG ETKKKTRVVT
501: DTLNPIWNQT FDFMVEDALH DLLMVEVWDH DTFGKDYIGR CILTLTRVIL EGEFQDTFVL QGAKSGKLNL HFKWTPQPIY RDRDRDQ
101: FEQYKSFILA SLHFSKLTLG TVAPQFTGVS ILESDDSAII MELELQWDGN PNIVLDIQTT LGISLPVQVK NIGFTGVLRL IFKPLVSEFP CFGAVCCSLR
201: EKSKVEFTLK VIGGEMTAIP GISDAIEVFL IHHPLYFSMY YFCHVTFIEQ FQGTIRDTIE DTLTWPNRII VPIVPGDYSD LELKPTGVLE VKLVEARDLK
301: NKDLVGKSDP FALIYIRPLH DKTKKSKTIN NDLNPIWNEH YEFVVEDIST QHLTVKIYDD EGLQSSEIIG CARVDLADIQ PGKVKDLWLD LVKDLEIQRD
401: KKPRGQVHLE LLYYPYAKHE GVPNPFANQI QLTSLEKVLK TESNGYDINQ RKNVIMRGVL SVTVISAEEL PPMDIGGKAD PFVVLYLKKG ETKKKTRVVT
501: DTLNPIWNQT FDFMVEDALH DLLMVEVWDH DTFGKDYIGR CILTLTRVIL EGEFQDTFVL QGAKSGKLNL HFKWTPQPIY RDRDRDQ
001: MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELANTVA AFARMTVEDS RKLLPPEFYP SWVVFSERQK LTWLNHHLTK IWPYVDEAAS ELIKASVEPV
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
101: LEQYRPAIVA SLTFSKLTLG TVAPQFTGVS VIDGDKNGIT LELDMQWDGN PNIVLGVKTL VGVSLPIQVK NIGFTGVFRL IFRPLVEDFP CFGAVSVSLR
201: EKKKLDFTLK VVGGDISAIP GLSEAIEETI RDAVEDSITW PVRKVIPIIP GDYSDLELKP VGMLEVKLVQ AKNLTNKDLV GKSDPFAKMF IRPLREKTKR
301: SKTINNDLNP IWNEHFEFVV EDASTQHLVV RIYDDEGVQA SELIGCAQIR LCELEPGKVK DVWLKLVKDL EIQRDTKNRG EVHLELLYIP YGSGNGIVNP
401: FVTSSMTSLE RVLKNDTTDE ENASSRKRKD VIVRGVLSVT VISAEEIPIQ DLMGKADPYV VLSMKKSGAK SKTRVVNDSL NPVWNQTFDF VVEDGLHDML
501: VLEVWDHDTF GKDYIGRCIL TLTRVIMEEE YKDWYPLDES KTGKLQLHLK WMAQSIYRDS
Arabidopsis Description
SYT5Synaptotagmin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L706]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.