Factsheet for TraesCS7B01G347000.3

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G437000.1	Wheat	extracellular, vacuole	90.47	96.85
TraesCS7A01G447300.1	Wheat	extracellular, vacuole	90.12	96.47
HORVU7Hr1G101310.22	Barley	extracellular, golgi	88.56	94.81
Os06t0685300-00	Rice	endoplasmic reticulum, extracellular	76.6	81.85
EER88839	Sorghum	endoplasmic reticulum, extracellular	75.22	80.97
Zm00001d014499_P004	Maize	endoplasmic reticulum, extracellular	63.26	73.44
VIT_18s0001g14590.t01	Wine grape	cytosol	10.75	67.39
VIT_09s0018g01580.t01	Wine grape	cytosol	10.57	66.3
GSMUA_Achr4P18220_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	50.78	62.21
VIT_12s0055g01250.t01	Wine grape	cytosol, mitochondrion	12.82	61.16
VIT_10s0003g03240.t01	Wine grape	mitochondrion	12.82	61.16
VIT_13s0019g04450.t01	Wine grape	endoplasmic reticulum, extracellular	54.25	57.54
KRG91923	Soybean	endoplasmic reticulum, extracellular, plasma membrane	53.73	56.88
KRH34856	Soybean	extracellular	52.69	55.78
VIT_08s0040g01740.t01	Wine grape	endoplasmic reticulum, extracellular	51.99	54.84
AT5G04220.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	51.13	54.63
PGSC0003DMT400055528	Potato	mitochondrion	51.13	54.13
Solyc09g007860.2.1	Tomato	endoplasmic reticulum	50.78	53.76
Bra009476.1-P	Field mustard	endoplasmic reticulum, extracellular	50.43	53.49
CDY41389	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.09	53.12
CDX70250	Canola	endoplasmic reticulum, extracellular	50.26	53.02
TraesCS5B01G330600.1	Wheat	endoplasmic reticulum	48.01	50.09
TraesCS5B01G330500.1	Wheat	cytosol	24.78	48.64
KRH15981	Soybean	extracellular	12.3	47.02
KRG95324	Soybean	extracellular, plasma membrane	7.45	35.54
TraesCS2B01G545700.3	Wheat	endoplasmic reticulum, extracellular, plastid	26.34	26.67
TraesCS4B01G222600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	22.53	25.54
TraesCS2B01G262400.1	Wheat	plasma membrane	21.32	24.21

Protein Annotations

Gene3D:2.60.40.150	MapMan:5.8.1.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:IPR000008	InterPro:IPR031468	InterPro:IPR035892	PFAM:PF00168	PFAM:PF17047
PRINTS:PR00360	PFscan:PS50004	PFscan:PS51847	PANTHER:PTHR10774	PANTHER:PTHR10774:SF62	SMART:SM00239
InterPro:SMP_LBD	SUPFAM:SSF49562	InterPro:Synaptotagmin_SMP	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G347000	EnsemblPlants:TraesCS7B01G347000.3
TIGR:cd00030	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:603585738..603596402

Molecular Weight (calculated)

65816.9 Da

IEP (calculated)

9.563

GRAVY (calculated)

-0.122

Length

577 amino acids

Sequence
(BLAST)

001: MGLVGGILGF VLGLPLGLAA AYLVYLRFFA PRRRLQDPVI RPLRDLDYET LQTMVHDIPL WVKYPDYERI DWMNKFICDM WPFLDKAICK IIRGVAKPIC
101: DQYVGKYGIE SIEFGNLTLG ALPPTLQGIK VYEMREKELV IEPVIRWASI ANVTVNVKVH SFKLSAQLLD LHIMLTPRAT LKPLVPSFPC FASVCVSLME
201: KPHVDFGLKF LGGDVMAIPG LYRFVQEQIS KQIAILYHWP KVIEVPILDG ASGATKKPVG VLHVKVVRAM NLPKMDLLGK SDPYVKLRLS GERLPSKKTS
301: VKMSNLNPEW NEHFRLVVKN PETQVLELQM FDWEKVKMHD KMGVQVIPLR LLTPYESKLF TLDLLRSMNP NDQQNKKNRG KLAVELTFDP FREENSTSPL
401: ISDGEGNISL KRDVPDGGGV LLVSVENAED VEGKRHTNPY AVVLFRGEKR ETKVIRKARD PRWNEEFQFV VDEAPMDEKI HIEIRSRRRR LLPFRTQVCC
501: SHFFFPNSLS LPAVVPSQSL TPAELLSRVL LYGLQESLGH VNINLVDVVN NGRINEKYHL INSRNGKLQL EIKWNTV

Best Arabidopsis Sequence Match ( AT1G20080.1 )
(BLAST)

001: MGIISTILGV IGFGFGTTIG IVIGYYLFIY FQSTDVEDPE IKPLVELDSE TIATMFPEIP MWVKNPDFDR IDWLNKLIGH MWPYMDKAIC KMAKSIAKPI
101: IAEQIPNYKI DSVEFEMLTL GSLPPSFQGM KVYATDDKEI IMELSVKWAG NPNIIVVAKA FGLKATVQVI DLQVYATPRI TLKPLVPSFP CFANIFVSLM
201: DKPQVDFGLK LLGADVMAIP GLYRFVQEII KDQVANMYLW PKTLNVQIMD PSKAMKKPVG LLSVKVIKAI KLKKKDLLGG SDPYVKLTLS GDKVPGKKTV
301: VKHSNLNPEW NEEFDLVVKE PESQELQLIV YDWEQVGKHD KIGMNVIQLK DLTPEEPKLM TLELLKSMEP KEPVSEKSRG QLVVEVEYKP FKDDDIPENI
401: DDPNAVEKAP EGTPSTGGLL VVIVHEAEDL EGKYHTNPSV RLLFRGEERK TKRVKKNREP RWDEDFQFPL DEPPINDKLH VEVISSSSRL IHPKETLGYV
501: VINLGDVVSN RRINDKYHLI DSKNGRIQIE LQWRNSS

Arabidopsis Description

SYT2Synaptotagmin-2 [Source:UniProtKB/Swiss-Prot;Acc:B6ETT4]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.